YALI0F21879g

Overview

Description similar to uniprot|Q02884 Saccharomyces cerevisiae LPG7P (YPL101w Saccharomyces cerevisiae YPL101w RNA polymerase II Elongator protein subunit)
Locus type CDS
Locus tag YALI0F21879g

Location

Species Yarrowia lipolytica Positions 2895685..2897052
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1368 (nuc.)
Previous locus YALI0F21868g Next locus YALI0F21901g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21879g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21879gYALI0F21879g_mRNA-001YALI0F21879g_CDS-001

Nucleotide sequence

 

>YALI0F21879g
ATGTCTTTTCAGAAGAAAAACGTTGCTGTTCCCAACCGGGCGGCCGTAGATCGCAACTCC
GGTAATCCCCATCCTCTCAGAGGTCCTCCAGCCAATTCGTCTCATCCAAGCGTCCAAGGT
AGAAGCCCCAGGGCTCCCTTTACAGGTTCCACAGAAGCCCGGGGGACCTCTGGTGTGACA
CACGCTGTTCAACCCGTCCCAAACACAAAACCTTCACTTTTGCAGTCCAGTACGCCGACC
GTGTCGTCTGGATGCTTCGATTTCGACAAACTGGTCGGTCATAACGGCATTCCTACCGGT
ACTCTGACTCTGCTAGAGGAAGAATCGACTACAGATTATGCCAGCATTCTGATAAGAATG
TTTGCAGCACAGGGGTGCATTGATCGAAGGAATGGCGGGTCTGAGGTGGCGGTGGTAGGA
GCTAATGATGCATGGGGACGACAATTGCCAGGAGAGAGCGACAAGAAGAGCAGGTCCCGT
GATCCCAGCTCCAAGGCTGGCTCTGGAGCAATGAAGATTGCCTGGAGATACGGCTATAAC
AGTGAGGTGGAGCGAAAAGAGCAGCTTGCAGAGAACAACACAGCCACTTTCGATCTAACT
AAGAGACTGGGTGGTCCAGAGATCTCAAAGATTAGATACTTGAAACCAGATAAGTCGATT
GTTCCCGAAATCAAAAAGCTCGCATCCGCCGCGGCTTCCGAGAACTCGATTCTGCGAGTA
TGCATTCCCACCTTCCTTCATCCTGCTATTTATGATAAGCAGATGGCTGATTCAGATTAC
GTTATTGGCCTTTTCACACAGCTCAGGGCCCTCACTAGAGAGTACAAGAGACATCTTGTC
ATTATCGTGTCTCTGCCTCTGGTTCTGTACCCCAAATCGTCTCCTTTGACTCGATGGATG
GAACTTCTGGCTGACTGCGTGCTTGATTTCTTCCCTTTTGACGTCAAAGTGCAGGAGCGA
GAGTTCCAGGGCCTGGTGAATGTTTCTAAGCTGCCATGCCTGTCTGACAGAGGTCACATG
CTTGTTACTCAGAGCGAGTATGCCTTCCGAGTGACGAAACGGACTTTTGAGATTGACGAG
TGGAGTATCCCTGTTGAGGAGGATGACGGAGAGAAGAAGGAGGATGCCTTAGCCTTTTAA
GCAGATGGAATATGGCAATATTCGACAATAATGATAGCCTAGCTTCCTTGAGAGTCAGAC
TAAAATGGGCCAGTTTATTCAAACTTGAATTGAGCCCAAGTGAGGGGTGTTTGAGGAGCA
TCTTTCAAGGCACTTCAGCATTTCAAGGAACAGGGTAGTGCTATACAGGCCAAACGCATA
TCCTTCAAACACAACCAGTTTCTCTATATTTAAAAAACTGACCCTTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21879g_CDS-001

Protein length: 380 aa.
Product: Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex, putative

>YALI0F21879g_CDS-001 MSFQKKNVAVPNRAAVDRNSGNPHPLRGPPANSSHPSVQGRSPRAPFTGSTEARGTSGVT
HAVQPVPNTKPSLLQSSTPTVSSGCFDFDKLVGHNGIPTGTLTLLEEESTTDYASILIRM
FAAQGCIDRRNGGSEVAVVGANDAWGRQLPGESDKKSRSRDPSSKAGSGAMKIAWRYGYN
SEVERKEQLAENNTATFDLTKRLGGPEISKIRYLKPDKSIVPEIKKLASAAASENSILRV
CIPTFLHPAIYDKQMADSDYVIGLFTQLRALTREYKRHLVIIVSLPLVLYPKSSPLTRWM
ELLADCVLDFFPFDVKVQEREFQGLVNVSKLPCLSDRGHMLVTQSEYAFRVTKRTFEIDE
WSIPVEEDDGEKKEDALAF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG