YALI0F21857g

Overview

Description similar to uniprot|P36091 Saccharomyces cerevisiae YKL046C DCW1 Putative mannosidase, GPI-anchored membrane protein required for cell wall biosynthesis in bud formation
Locus type CDS
Locus tag YALI0F21857g

Location

Species Yarrowia lipolytica Positions 2892928..2894373
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1446 (nuc.)
Previous locus YALI0F21835g Next locus YALI0F21868g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21857g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21857gYALI0F21857g_mRNA-001YALI0F21857g_CDS-001

Nucleotide sequence

 

>YALI0F21857g
ATGAGAATACAACTCGTCGCAGCCCTTTGCGGTTTGATTACTACCGTAACATGTGCACTC
AACCTTGACCTCAACTCACCTGTATCTGTCAACAATGCTGTGGCTTTGGTTGCCCAGGGA
ATGCTCGATTATTACGACGGGTTCCGATTCGGTGGCACAATTGGAATGTTTGTTCAACCG
TACTATTGGTGGCATGCTGGAGCTGCGTGGAACGCCATGATCGAATACTGGCACATCACC
GGTAATTCATCTCTTAACGATATCACTTACGAGGCTCTTTTACACCAGCGAGGAGAACGG
TTCGATCTCATGGTGTTCAACTTCTCCTCCTCGGAAGGTAACGATGACCAAGGCGTCTGG
GGAATGACCATGATGACTGCCGCCGAACGTAACTTCACGGCCCCCACAGACGAGTATGGC
TGGTTGTACGTTGCTCAGGGCGCCTTCAACACCATGGCTTCCAGATGGGACGACATCTGT
GGAGGAGGTCTTCATTGGCAGATTTACCAGTGGAACTCTGGATACTCTTACAAGAACGCC
ATTGCAAGCGGAGCCCTGTTCAACATTGGAGCCCGTTTATATCGATACACAGGTAATGAG
ACGTATCTGGAGTGGTGTGACAAGATCTGGAACTGGGCCGAGGCTGTGGATCTCGTGACA
AAACAATACGAGGTGTACGATGGTATCGAGACAGGTTCCGGTAACGTGCCCAACTGTACC
AACCGAACTCCGTACATTTGGACCTACAACTCTGGAATCTTCATGCACGGAGCCGCTGCC
TTGTACAACGGAACGCTCCTGAGAAATGGAACAGGTTCGGAAAAGTGGGGGCAACGAGTC
AGAGGTATTTTCAACACTGCCGTCTCTCCTCTGCACTTCTTTGGGGGTCCTGAAGGCAAC
ATTATGCGTGAAATCGCCTGTCAACAGGCTACAATTACCTGTGATGCCGATCAGAGAACC
TTCAAGGGCATCTATTCGAGTCTTCTCGGTCAGACTGCTCAGCTAGTGCCTGATTTGGCC
CCTGAGATCATGAAGTATCTTGTTCCTAGTGCCATGGCAGGAGCTAGAACCTGTTCTGGT
GGACGAGATGGCCACACCTGCTCTTTGGACTGGCTGACAGGCAAGTACGACGACCAATAC
ATCGGTCTGGGAGAACAACTCTCAGTTCTGGGTGCTATTCTCAACACCCAAATCATGAGC
TCGGAAGGTCCACTGGCTGATATCACTGGAGGAGACTCCAAGGGTAACGGATCGGCCGGC
ACTGTATTTGAGTCTCCTTATGCCAACACCATTGCTGCGCCACTAACTATTGGACCTGGT
GACCGAGCCGGTGCGGGTATCATCACTGCTGTTGTGTGCATCGTTCTCATTGGTTCAGGA
TGGTGGTTGCTCACTGACGGCATGTACAAGGGGTTCAAGATCAAGAGAAGAGACCCTTCA
GAGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21857g_CDS-001

Protein length: 482 aa.
Product: Mannosidase, putative

>YALI0F21857g_CDS-001 MRIQLVAALCGLITTVTCALNLDLNSPVSVNNAVALVAQGMLDYYDGFRFGGTIGMFVQP
YYWWHAGAAWNAMIEYWHITGNSSLNDITYEALLHQRGERFDLMVFNFSSSEGNDDQGVW
GMTMMTAAERNFTAPTDEYGWLYVAQGAFNTMASRWDDICGGGLHWQIYQWNSGYSYKNA
IASGALFNIGARLYRYTGNETYLEWCDKIWNWAEAVDLVTKQYEVYDGIETGSGNVPNCT
NRTPYIWTYNSGIFMHGAAALYNGTLLRNGTGSEKWGQRVRGIFNTAVSPLHFFGGPEGN
IMREIACQQATITCDADQRTFKGIYSSLLGQTAQLVPDLAPEIMKYLVPSAMAGARTCSG
GRDGHTCSLDWLTGKYDDQYIGLGEQLSVLGAILNTQIMSSEGPLADITGGDSKGNGSAG
TVFESPYANTIAAPLTIGPGDRAGAGIITAVVCIVLIGSGWWLLTDGMYKGFKIKRRDPS
E*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG