YALI0F21835g

Overview

Description similar to uniprot|Q871T2 Neurospora crassa CAD70909 Related to centractin (ARP1)
Locus type CDS
Locus tag YALI0F21835g

Location

Species Yarrowia lipolytica Positions 2889427..2891081
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1655 (nuc.)
Previous locus YALI0F21813g Next locus YALI0F21857g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21835g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21835gYALI0F21835g_mRNA-001YALI0F21835g_CDS-001

Nucleotide sequence

 

>YALI0F21835g
ATGAAATACCTAGTGGTCCATGTCCTCACCACATGCGACGAACAGGGTGTCTACGTGACA
CGAGACTCCACGGAGATCATCGAGGTTGCGTGGACCACCGTTTCGCCAGACTCCATTTCG
CCCATCCAGTCCACCTTGGTTCGACCAGTCAACACCCCCATCACTCCGTTGTGCACACAG
CTGACAAGTATTACATGGGAAACTGCCTCTTCGGGAGTTCTTCTGCAACAGGCCATCGCT
CAGTTTGCTGCCTCCGGCGCCGCTGACGAGGGCACTGTCTACGTGTGTCTGGACTCGTGG
GATTTAAGGGTGCAGTTGGAACGAGAGTCGCGTGACAAGGGTGTGAAGCTGCCTCCCGTC
ATGGCTCACCCCAGAGTTTTTGATCTGGCCAAGGAGTGGGAAAAGTGGGCCACACAGAAA
GGCATGGTTCCTGCCACTCCCACACCTCTGATCCAGATTTGCAACTCTCTCGACGTTCTG
CCTCCTACCTCTCCCCGGGCCAAAGACATGGTCACCACGGTGGCTTCATGCCTACACAAA
CTGATGCATGTGGCTCCCGCTAGAGAATTTCCCACCGTGCTGACCCGACCACTTGACGTG
GAGGCCGATCTGAGAGCTTTTCTCACCGGAGGATGCAAGGTGTTGCATTTGGAAAACCTA
CCGCTGGACACGACCCAGAGCGAGCTGGAATCATGGTTCATACAGCATGGCGGACGGCCG
ATCGGGTTCTGGACGATGCGAACACCAGAACAGCATAAGCCCACAGGTTTCGGGTTCGCC
ATGTTCGCCTCACATGAAGAGGCGGTCGAGGCTCTGGCTCTTAACGGTAGAGCTCTAAAC
GACAAGGTGGTCGAGGTGAGTCCCAGTTCGGAGCAGGTCATCGAACGTGCTCAAGATCTG
CTGACTCCCTTTCCCCCCAGCAAAAACAGACCCCGACCTGGCGACTGGACTTGCCAGGTT
TGTGGATTCTCCAACTTCCAGAGAAGAACAGCCTGCTTCCGATGCAACGAAGCCATCGGA
GTGGGAGGTCACAACGGCAACATGGGCGGTGCACAAAACGGATATCAGAACGCCAACCCT
GGCAACAACGGTGGCTACCAGAACAGCAATGGAGGTGGCTACCAGAATGGCAATCATGGT
AACGGAGGAGGCTACCAGAACGGGTACCATGGCAACCATAGCAACCATGGTAACCACGGC
GGTAACCGGTCCGTTCCGTTCCGTGCTGGCGACTGGAAGTGCGGCAAAAATGGCTGCTCG
TACCACAACTTTGCCAAGAATGTGGCATGTCTCAAATGCGGAGCTTCTCGAGGAGAAGCG
GCGGTTGTGGCCGACGCCAATTACGTCAGGTTTTACGGTACCCCGGGAATGGGGCAAGGT
ATGGGTTTAGGAATGGGTCAGAATTATAACCAGTATCAGGGATACGGCTACAAGGATGTG
AATACTTGAGCTGTGCTTCTAGTGACTCTCGGTTTTGTTCTTTGCACATATTACACACTT
TTGGTTTTTGGTCACGTGTACACGGTTCTAATGAACGCGTGACCGGTTTGATCACTTGTT
GATCGGGATGCATGTATACATGGGTTTATTCATAAGTAATCGGTTAGGTGGTTTGAGATG
GTGAACGTACCGCAGTAAGTGTAAAGTGCTTCGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21835g_CDS-001

Protein length: 483 aa.
Product: RNA-binding protein, putative

>YALI0F21835g_CDS-001 MKYLVVHVLTTCDEQGVYVTRDSTEIIEVAWTTVSPDSISPIQSTLVRPVNTPITPLCTQ
LTSITWETASSGVLLQQAIAQFAASGAADEGTVYVCLDSWDLRVQLERESRDKGVKLPPV
MAHPRVFDLAKEWEKWATQKGMVPATPTPLIQICNSLDVLPPTSPRAKDMVTTVASCLHK
LMHVAPAREFPTVLTRPLDVEADLRAFLTGGCKVLHLENLPLDTTQSELESWFIQHGGRP
IGFWTMRTPEQHKPTGFGFAMFASHEEAVEALALNGRALNDKVVEVSPSSEQVIERAQDL
LTPFPPSKNRPRPGDWTCQVCGFSNFQRRTACFRCNEAIGVGGHNGNMGGAQNGYQNANP
GNNGGYQNSNGGGYQNGNHGNGGGYQNGYHGNHSNHGNHGGNRSVPFRAGDWKCGKNGCS
YHNFAKNVACLKCGASRGEAAVVADANYVRFYGTPGMGQGMGLGMGQNYNQYQGYGYKDV
NT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG