YALI0F21769g

Overview

Description similar to uniprot|P36000 Saccharomyces cerevisiae YKL135c APL2 AP-1 complex subunit, beta1-adaptin
Locus type CDS
Locus tag YALI0F21769g

Location

Species Yarrowia lipolytica Positions 2879696..2882086
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2391 (nuc.)
Previous locus YALI0F21747g Next locus YALI0F21791g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21769g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21769gYALI0F21769g_mRNA-001YALI0F21769g_CDS-001

Nucleotide sequence

 

>YALI0F21769g
ATGTCGTTGGAAAAACGGATCCGAAGCGTGTTCCAGGCGCCCAAAAAGGGCGAGACGTAC
GAGCTGCGGTCCGGACTCGTGTCGCAGTACGCGTCCGAGCGAAAGGAGGCTATTCAACGC
ACGATCCAGGCCATGACCCTGGGCAAGGATGTTTCTGCTCTGTTTCCGGACATTATGAAA
AATCTCGCCACCCACGACATTGAGCAGAAGAAACTCGTCTATCTGTATCTAATGAACTAC
GCCAAGTCGCACCCCGAGCTGTGCATTCTTGCCGTCAACACCTTTGTGGGAGACTCCGGC
GACCCCAATCCGCTGGTTCGAGCCCTCGCCATCCGAACAATGGGCTGTATTCGAGTTGAC
AAGATGGTCGACTACATGGATGGACCTCTGCGAAAGACTTTGGGCGACGACAATCCCTAC
GTGCGAAAAACTGCCGCCATCTGTGTCGCCAAGTTGTTTGATTTGGCTCCCGAAACCTGT
GTGGAGGAGGGCTTCCTGCAGACGCTGCAAGGACTCATGAGTGACTCCAACCCCATGGTA
GTGGCCAACGCCGTCAGCGCCCTGGCTGAGATTCAGGACAGAGACCCCTCGACAAACTGC
TTTGTTATTAATTCGCACATTCTCGGCAAGTTGCTCAGTGCTCTCAACGAATGCACCGAA
TGGGGTCGAGTCACCCTGCTGACCTCCCTGGCCGACTATACTGCCGATGGCGACGAGGGC
ACCCACATTGTCGACCGTGTGGTACCCCAATTCCAGCATGCCAACCCGTCTGTCGTTCTG
GCAGCCGTCAAGTGTGTGCTGGCACACCTGCACACACAAACGGAGGAGAACCGGGAGATT
CTGCTACGAAAGATTTCTCCCCCTCTGGTTTCGCTCGTAGGCTCGTCGTCACCCCCAGAG
GTGCAGTACGTATCTCTGCGAAACATTCGACTGATTCTGCAAAAGTACCCACAGCTGCTG
TCACGAGACCTCCGAGTCTTCTTTGTCAAGTACAATGACCCCGCCTACCTCAAGATGGAG
AAGCTCGAGATTCTCGTGCGAGTGGCCAACGACAACAATGCCAGTCAACTGCTTGCAGAG
CTCAAGGAGTACGCTCTTGAAGTTGATATCGACTTTGTGCGACGAGCCGTGAGAGCCATT
GGCCAGCTGGCTATCAAGATCCCCTCGTCGGCTGAAAAATGCGTGTCGCTGCTACTTGAG
CTATTGGACACCAAGATCAACTACATTCTGCAGGAGGTGGTCATTGTCTTCAGGGACATT
CTGCGACGATACCTGCCTGGTGGAGTGGCTGATAAGGCCATCTCCAACCAGGTGTTCGCA
CCCGTGATCCCCTTGCTGTGCGAAAACATGGACGAGATTGATGAACCTGAAGCCAAGGCC
GCCATCATCTGGATTCTGGGCGAATACGTCGACCAGGTCCCCAACGTGGCTGAGATTCTG
GGCTCTATAACCCCCCAGTTTCTGGAGGAGTCCACACCCGTGCAGCTGCAGCTTCTCACA
GCTGTGGTCAAGCTGTACGTAAAGAAACCCGACCAGGGTCAGCGGCTGATCCAGGAAACC
CTCAACACTGCTACCTCGTCCTCGGACAATGCTGACATTCGAGACCGAGCCTACATTTAC
TGGCGTCTTCTGTCGTCAGACACGGCCTTCGCCCAGAGTGTGGTTGGAGCCGATAAGCCC
CCCATTGCTTCTATTATCCCTGAGGTTCAGCCTGCTCTCCTAGACGAGCTTCTGAGCGAG
CTGGGCACTCTCGCATCGGTCTACCACAGACCTGCCTCTACTTTCATGGGTAAGGGCAAG
TTTGGCGCTGATGCTATACAGAAGCGAGCCATCGAGGAGCAGCGAGCGCTTGCTCAAGAC
GGTGCCGCCGCGGCTGCTGTTGGAGCTGCTTCCGGAGGTGTCAACATTGAGAACCTGTTG
GACATCGATTTTGATGGAGCCGCTCCCGCTTCTGCTGCTGCCAACACCGACAACCTGAAC
GACCTCGACGGTCTGTTTTCGCACACAGACGGCAACACGGACGCTGCTGCTGCCGCCTCT
GGTGCCTCTGGTGCCACTGGAGCTTCTTCCATGAACGACATCATGTCACTGTTTGGAAAT
TCCAGCAGCATGGGCGGTGGCATGAGCGGAATGGGTGGCATGGGTGGCATGGGTGGTTCT
ATGGGGTCTCCTGCACCCATGGCTGCCCCTGCCGACCCGTTTGCTTCGTTGTCTGCTGTT
AACACCGCAGATGCCTTTGCCTCTCTCAATATTGGCAACGGTTCGGAAAAACCAAAGGAA
CAGCCTGCTCAGCAGCAGCAGCAGCAGGGACAGGGAAAAGCCAATGATGATCTACTTGGC
TTGTTTTAGATGGAGGAGTATATAATAATGGCATGAATGAGTATAAATGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21769g_CDS-001

Protein length: 783 aa.
Product: Beta-adaptin subunit of the clathrin-associated protein (AP-1) complex, putative

>YALI0F21769g_CDS-001 MSLEKRIRSVFQAPKKGETYELRSGLVSQYASERKEAIQRTIQAMTLGKDVSALFPDIMK
NLATHDIEQKKLVYLYLMNYAKSHPELCILAVNTFVGDSGDPNPLVRALAIRTMGCIRVD
KMVDYMDGPLRKTLGDDNPYVRKTAAICVAKLFDLAPETCVEEGFLQTLQGLMSDSNPMV
VANAVSALAEIQDRDPSTNCFVINSHILGKLLSALNECTEWGRVTLLTSLADYTADGDEG
THIVDRVVPQFQHANPSVVLAAVKCVLAHLHTQTEENREILLRKISPPLVSLVGSSSPPE
VQYVSLRNIRLILQKYPQLLSRDLRVFFVKYNDPAYLKMEKLEILVRVANDNNASQLLAE
LKEYALEVDIDFVRRAVRAIGQLAIKIPSSAEKCVSLLLELLDTKINYILQEVVIVFRDI
LRRYLPGGVADKAISNQVFAPVIPLLCENMDEIDEPEAKAAIIWILGEYVDQVPNVAEIL
GSITPQFLEESTPVQLQLLTAVVKLYVKKPDQGQRLIQETLNTATSSSDNADIRDRAYIY
WRLLSSDTAFAQSVVGADKPPIASIIPEVQPALLDELLSELGTLASVYHRPASTFMGKGK
FGADAIQKRAIEEQRALAQDGAAAAAVGAASGGVNIENLLDIDFDGAAPASAAANTDNLN
DLDGLFSHTDGNTDAAAAASGASGATGASSMNDIMSLFGNSSSMGGGMSGMGGMGGMGGS
MGSPAPMAAPADPFASLSAVNTADAFASLNIGNGSEKPKEQPAQQQQQQGQGKANDDLLG
LF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG