YALI0F21747g

Overview

Description similar to uniprot|Q12510 Saccharomyces cerevisiae YDL156W Conserved protein of unknown function
Locus type CDS
Locus tag YALI0F21747g

Location

Species Yarrowia lipolytica Positions 2877966..2879633
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1668 (nuc.)
Previous locus YALI0F21725g Next locus YALI0F21769g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21747g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21747gYALI0F21747g_mRNA-001YALI0F21747g_CDS-001

Nucleotide sequence

 

>YALI0F21747g
ATGAGTGAACTGGAGCAGATTCGTCTGGCCAACATTGAGCGAAACAAAGCACTGTTGGCG
GCTCTGAATCTTCCCACAGAGGCCAAAAAGGAGAGCGTGGACCCTGAGGTTGCGCCGAAG
AAGAGTAGGAAACGAAACTCAGCTCGACTTGAGTCGCCTGACGATGGATCTGACGATTCC
GCGCCCAGAACTCGACGAAAATCGCGTCGGCTGCAGGGTCTGGATCCCGAGGCAAACGCA
CTGAAGCAGGAGGACCTGGGAGGTAGCGGTGAGCTCAAGCGACTGATGCAACAGCTCAAT
GGAGGAGTCAAGAAGGAGCGACTGTCTGGAGATCTGAGTCTCAAGGAGATGCTAACTAAG
ACTGGACTCGACGAAAAGGAGTGGAGTGCGTCGCTGGGCCAGCTGTTTGGAGACGGATCG
AGGGTCAGTCAGGGAGATTTCTTTGATGAGATTGTCAAGAAGGAAGAAGAGGATACTAAG
GACATTGACATCAAGCAGAGCAGAGACAACTTGAGCGGTCTGCAGCTCGGAAAAATGTCC
AAAGTAACTAAAGAGCGAATCTACATCACTGCTGTGCATCCTGGTACAGATAAACGGATT
GTTTTGGCCGGAGACAAGATTGGAGTGTTGGGTATTTGGGATGTTGATTCCGATAACGAG
CCCCTACAGTTGCAATTGCACCACGCTACCATTCCTGCTCTTTGTTTCGATCAAAATTCC
AACGATATTTTGTATTCCGCTTCCTATGACGGTTCTGTGAGAAGTCTGGAGCTGAAAACA
GGCAAGAGTGGAGACGTTTTGGACTTGGAGGCCAAGAAGAACGCCAGTGTTGGTGTTTCG
GACGTGGCAAATCCCCAACCTCATCTTCTTTATGCCTCTACTCTTTGCGGTCACCTGATT
CGAAAAGATCTACGAACGAAATCAACTGAATATGAGACTCTGATTCTCGGAGAAAAGAAA
ATTGGTGGCTTCTCGGTGGACCCCATCAACACTCATTTGCTTGCGACCGGATCGCTGGAT
AGATCGATGCGAATATGGGACCTGAGAGCAACTGAAACTGCCAGAACCATTCCTGGGGGA
GAAGTCATCGACACACAGTTCCAGATGCCCCATCTCCAAGCCATCTACAACTCCCGACTG
TCTGTGTCTTCTACCGACTGGAACCTGGCTGGCCAGATTGTCTGCAACGGCTATGACGAC
ACCATCAACATCTTCAACCAGAGTGACTACTTCTTGGATATGTTGAATGACGGTAACGGA
ACAGAGCCTGTGAAGAAGACCCGACGAACCAGAAATTCCAAACTTGCTGAACCCGAGATC
AGCGACCAGGAGCTGCCCGAAATCAAGAAACCTTCCGTTCGAATCAAACACAACTGCCAG
ACTGGCCGATGGGTTACTATTCTCAAAGCTCGATGGCAACAACAGCCTCTGGACGGCGTG
CAGAAGTTTGCAATCGCCAACATGAACCGATACATTGACATTTATTCTGGCACTGGTCAT
CAGCTTGCTCATCTTGGTGATGCCCTCATGACTGCTGTTCCTTCTGCTCTGGCTTTCCAT
CCTACTCAAAACTGGATTGCAGGAGGAAATTCCAGTGGAAAGATGTATTGGTGGGAGTAG
AGAGTAATATTGGACACACATTAATAGTTAACGAATTATGCGATATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21747g_CDS-001

Protein length: 540 aa.
Product: DNA-binding protein with preference for UV- damaged DNA, putative

>YALI0F21747g_CDS-001 MSELEQIRLANIERNKALLAALNLPTEAKKESVDPEVAPKKSRKRNSARLESPDDGSDDS
APRTRRKSRRLQGLDPEANALKQEDLGGSGELKRLMQQLNGGVKKERLSGDLSLKEMLTK
TGLDEKEWSASLGQLFGDGSRVSQGDFFDEIVKKEEEDTKDIDIKQSRDNLSGLQLGKMS
KVTKERIYITAVHPGTDKRIVLAGDKIGVLGIWDVDSDNEPLQLQLHHATIPALCFDQNS
NDILYSASYDGSVRSLELKTGKSGDVLDLEAKKNASVGVSDVANPQPHLLYASTLCGHLI
RKDLRTKSTEYETLILGEKKIGGFSVDPINTHLLATGSLDRSMRIWDLRATETARTIPGG
EVIDTQFQMPHLQAIYNSRLSVSSTDWNLAGQIVCNGYDDTINIFNQSDYFLDMLNDGNG
TEPVKKTRRTRNSKLAEPEISDQELPEIKKPSVRIKHNCQTGRWVTILKARWQQQPLDGV
QKFAIANMNRYIDIYSGTGHQLAHLGDALMTAVPSALAFHPTQNWIAGGNSSGKMYWWE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG