YALI0F21329g

Overview

Description similar to uniprot|Q07844 Saccharomyces cerevisiae YLL034c
Locus type CDS
Locus tag YALI0F21329g

Location

Species Yarrowia lipolytica Positions 2820605..2823275
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2671 (nuc.)
Previous locus YALI0F21307g Next locus YALI0F21362g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21329g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21329gYALI0F21329g_mRNA-001YALI0F21329g_CDS-001

Nucleotide sequence

 

>YALI0F21329g
ATGGCAGGCAAAAAACCAGGCAAAGGCAGATTGCAGAAACAGCAAGAAGCAAAGGTCTAT
GAGCTCACCGTGGATCTCATGGAGGAGAAATGCCAGGCTGACGACACTTTTTGCGCCAAG
AACCTGACCAACCTCGAGGTGTTTCGTTATGTGCAGGCACGAGGAGGTCCTACTGGGCGT
CTAGGAAAGCAGGAGCTGGGCCGGCATGTTGACGCAGCCATCACTTTGTTGCGACAAGAA
GAGGAGAGTGGCATGTTTGGTGGAAACCCCGAAAACGGTCTGAATGGAGACGCGATGGAT
GTTGAGGAAGATATTGATATCGCTGAGCCTGCCAGTGGGCCTATTTTTGGAGCTCCTGCC
CCCGAGAAGAAGGAAGACACTTCTACAGCATCCACTCCGGCTGTCTCCACCCCTATCCTG
GACTCCAACAGCATGAACAAGAGCGTGGTGGGTCTGTGGAACACCACGCCTGCTGGAGGT
GCTACTCCTACAGCTATCTCGGGAGCTGCTACTCCTGTCGAAGGCGGAGACAACGAAAAG
AAGAGAAAGCGAGAAAAAACTAAAGAGCGAGCCGCAAAGAAACAGAAGGGTATGTATGAA
AGAAGGAGGATCACTCAGAGTTACGGAACATTGGCTAACACAAGTAGAACACAAATCAGA
GCTTTCCATCAGCTTAGAAGATCTGGGAGGTATCGAGAAGGTTATTGAGCAGATCACCAA
GTCTGTTCTGGTTCCTCTGACGCATCCCGAGGTCTACAAGACTACGGGTCTCACTATGCC
TCGGGGTGTGCTTCTGCACGGTCCCCCTGGATGTGGTAAGACCGTTCTGGCCAATGCCAT
TGCTAACAAGGCTCAGGTTCCGTTCATGTCCATTTCCGCGCCCAGTGTGGTGTCCGGTAT
GTCTGGAGAGAGTGAAAAGAAAATCCGAGAGATATTCGAGGAGGCTCGGGCCATTGCTCC
CTGTCTTTTGTTTATTGACGAGATTGATGCTGTCACTCCTAAGCGAGAAGGAGGAGGACG
AGGCATGGAGACCCGAATTGTCGCCCAGCTGCTCACATGTATCGATGACCTGAACCCGGA
AAAGAATGATTTCCGACCCGTGATTGTTCTTGGAGCTACTAATCGACCTGATGCAATCGA
CCCTGCTCTGCGACGACCCGGTCGTTTCGACGAGGAGATCGCCATGGCTGTTCCAGACCG
AAAGTCCCGAGAACTCATTCTCAAAGCCATCACACGGCCTCTTAAGCTCAATGACGACAT
TGACTTCGAGCTGCTGGCCATGCGAACTCCCGGTTATGTGGCTGCTGATCTCAAGGCTCT
AGTTACTGCTGCAGGCTCTATGGCTCTGGAACGAGCCTTCAAGCAGCTCGTGGAGAATAA
GGAGGCTGGTCAGGAAACAAGCGACAAGATTGAGGAGATCAAGGATACAGATTCTATGGA
TGTGGAGGGTGCCCCCCAAGATGGGCAGCCCACTGAAGCTGTCAAGACTGAAACAGACAG
CATAAGTGCCGGTGATGTGAAGGAAGAGCCCGTTGAAACGCCTGTTGAGACCCCCAAGCC
CACTACTGTTATCACTCTCCCCAACCCCCCTCATACTTCTGTTTGGGTTGATTTCCTGCG
AATGTTCCCCAACCCCCTGACTGCTTCTCAACTTCAGAACATGGTCATTGCCCTCAATGA
TTTCCTGATGGCTATTCCTCTAATCCAGCCCTCTTCCAAGCGAGAAGGATTCGCAACTGT
TCCCGATGTCTCCTGGGAGGACGTTGGTGCTCTGGCTCAGGTTAGACAGGAGCTTCACAT
GGCCATTGTCCAACCCATTCGACAACCGGATCTGTTCAAGATGGTTGGTGTTGATGCTCC
TGGAGGAGTGCTTTTGTGGGGACCCCCTGGTTGTGGTAAGACCCTGCTTGCTAAGGCTGT
GGCTTCCGAAACTGCCGCCAACTTCATCTCTGTACGAGGACCCGAGCTTCTCAACAAGTA
CGTGGGTGAAAGTGAACGTGCTATCCGACAGGTGTTTGAGCGAGCTGCTCTATCGTCACC
CTGCATTATCTTCTTTGATGAGTTTGACTCTCTGGCTCCTCGACGAGACGACGGCGGATC
CGAGCATTCTTCCAGACTTGTCAACACTCTTCTTACCGAGCTTAACGGTCTCACTGAGCG
AAGAGGTGTGTACGTTATCGCTGCCACTAACAGACCAGATATTATTGATCCCGCCATGGT
TCGACCCGGTCGTCTGGACAAGACTCTGTTTGTGGGCTTGCCCGACGAGAATGAACGGTT
TGAAATTCTGTCGAAGGTGTGTCGAAAGCGACCCCTGGCTGCTGATGTCAACTTGCGGAA
CATCGTTGCGGACTCTCGATGTGGAAACTACTCCGGTGCCGATCTCACCCAGCTGGCCAA
CGAGGCTGGTCTCATGGCTCTCAGACAGCAAGTGTTCACCCATGGAGCTGAAATAATTCA
CGATCACAAGGCAGCTCCTCCAAGCAGCATTGAGATTACTAACCACCATTTTGAGGAAGC
CTTCAACAAGATCCGACCTTCAGTCACTGACGCAGATCGGCTCAAGTACGACGCTCTCAA
GCTCACTTGGTAAGGGGATGACAAAAAAAAAACTATAGATACATGATGATGCAATGACAG
TAATAAAATATACCAATGTAATGCGATGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21329g_CDS-001

Protein length: 845 aa.
Product: ATPase of the AAA family, putative

>YALI0F21329g_CDS-001 MAGKKPGKGRLQKQQEAKVYELTVDLMEEKCQADDTFCAKNLTNLEVFRYVQARGGPTGR
LGKQELGRHVDAAITLLRQEEESGMFGGNPENGLNGDAMDVEEDIDIAEPASGPIFGAPA
PEKKEDTSTASTPAVSTPILDSNSMNKSVVGLWNTTPAGGATPTAISGAATPVEGGDNEK
KRKREKTKERAAKKQKEHKSELSISLEDLGGIEKVIEQITKSVLVPLTHPEVYKTTGLTM
PRGVLLHGPPGCGKTVLANAIANKAQVPFMSISAPSVVSGMSGESEKKIREIFEEARAIA
PCLLFIDEIDAVTPKREGGGRGMETRIVAQLLTCIDDLNPEKNDFRPVIVLGATNRPDAI
DPALRRPGRFDEEIAMAVPDRKSRELILKAITRPLKLNDDIDFELLAMRTPGYVAADLKA
LVTAAGSMALERAFKQLVENKEAGQETSDKIEEIKDTDSMDVEGAPQDGQPTEAVKTETD
SISAGDVKEEPVETPVETPKPTTVITLPNPPHTSVWVDFLRMFPNPLTASQLQNMVIALN
DFLMAIPLIQPSSKREGFATVPDVSWEDVGALAQVRQELHMAIVQPIRQPDLFKMVGVDA
PGGVLLWGPPGCGKTLLAKAVASETAANFISVRGPELLNKYVGESERAIRQVFERAALSS
PCIIFFDEFDSLAPRRDDGGSEHSSRLVNTLLTELNGLTERRGVYVIAATNRPDIIDPAM
VRPGRLDKTLFVGLPDENERFEILSKVCRKRPLAADVNLRNIVADSRCGNYSGADLTQLA
NEAGLMALRQQVFTHGAEIIHDHKAAPPSSIEITNHHFEEAFNKIRPSVTDADRLKYDAL
KLTW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG