YALI0F21307g

Overview

Description similar to uniprot|Q04272 Saccharomyces cerevisiae YMR077C VPS20 Myristoylated subunit of ESCRTIII
Locus type CDS
Locus tag YALI0F21307g

Location

Species Yarrowia lipolytica Positions 2819643..2820422
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 780 (nuc.)
Previous locus YALI0F21285g Next locus YALI0F21329g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21307g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21307gYALI0F21307g_mRNA-001YALI0F21307g_CDS-001

Nucleotide sequence

 

>YALI0F21307g
ATGGGCAACCAGTCGTCCAAGGGCATCAAGGTGACCAGCCAGGACAAGGCAATTTTGGAT
CTCAAGCTGCAACGTGACAAGCTTAAGCAATACAAGAAGAAGATCCAAGTTGTTCTCGAC
AGTGAGGTGGAACTGGCTAAGGATGCGCTCAAAAAGGGAGACAAGAAGCGGGCTCTGCTG
GCTTTGAGAAAGAAAAAGTACCAGGAAGGTATGTTAATCAAGACAGACGAACAGCTGGAA
ACTCTAGAGAATCTCACATCGTCCATAGAGTTTGCTTTGGTTCAGAAGGATGTGGTCTAT
GGTCTTGAGCAAGGAAACAAGGTGCTCAAAGAGATTAATCAGGAGATTTCATTGGATCGG
GTTGAACGACTACGAGATGAGACAGAAGAGGGTATTGCATACCAGGAGGAGGTTTCGGCC
ATGCTCATGTCCAACATTTCTAACGCCGACGAGGAGGACGTTCAGGCCGAGTTGGAGGCT
CTGGAACAGCAGGAACGAGCCAAGTTGCCCCAGAAGCAGACTACATTCCCCGAGGTCCCG
AAGGACAAGATCGAGGAGCCTATGGACCTGCCCAAGGTTCCCGAGGGCATTCCGGAAGAC
AAGCAACCCGAGAAGAAAGAGCCTTTATTGGCGTAGAGGAAGACTTGGAGACTTTGAAAA
GACTCTCAACGTGCTCCAAGTTCCCTTACAGCATTCCCTTTTGATGATTTCATTTTAATA
ATAAGTTATAAATTAGACCAGCCACTGCAGAGCAGAGACTGTTACAGGTATGAATGTACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21307g_CDS-001

Protein length: 212 aa.
Product: Myristoylated subunit of ESCRTIII, putative

>YALI0F21307g_CDS-001 MGNQSSKGIKVTSQDKAILDLKLQRDKLKQYKKKIQVVLDSEVELAKDALKKGDKKRALL
ALRKKKYQEGMLIKTDEQLETLENLTSSIEFALVQKDVVYGLEQGNKVLKEINQEISLDR
VERLRDETEEGIAYQEEVSAMLMSNISNADEEDVQAELEALEQQERAKLPQKQTTFPEVP
KDKIEEPMDLPKVPEGIPEDKQPEKKEPLLA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG