YALI0F20944g

Overview

Description weakly similar to uniprot|Q03942 Saccharomyces cerevisiae YDR198c RKM2 Ribosomal N-lysine methyltransferase 2
Locus type CDS
Locus tag YALI0F20944g

Location

Species Yarrowia lipolytica Positions 2785970..2787265
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1296 (nuc.)
Previous locus YALI0F20922g Next locus YALI0F20966g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20944g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20944gYALI0F20944g_mRNA-001YALI0F20944g_CDS-001

Nucleotide sequence

 

>YALI0F20944g
ATGGAAAACAGCCACGTGCAGTTAATAGAGTGGATCACCTCCAACGGTGGATATATCTCG
CCCAAGTTGGAAATCCGAGAACTCCCTGGCCGAGGAAGAGGTCTTGTGGTAAATGATCGT
GTATACCCCAATGAGCGTCTGATTCACCTAAAGCTTCGCCAGCTGCTCAATTACTCTTCG
ATCCATAACGCAATGGTAGACGGCGGCCACCTGTCAGAAACAGAGTACCGTAGCATGTCG
GCCCATCAGGTGTTAGCTCTATTCCTTGTGATCCAGCAGAGCTTAGGGTCCAAAAGTGAC
TGGAAGGCTTTCATGGGGCTGTTGCCAGACAGAAAAGAAGGCTTCCTGGATGTGCCATTG
CAATGGTCCAAGGAGGATCAGGACTCGCTGACTCCGGAGGGCATTGTGGTGTTGAAAAAG
ACACTGGACACGTTCGAGGCAGACTACGACAAGACCAAGACGTTTGTGGCCAAGTACGAC
TCGGATCCGAGAGACGCCTATCTCTGGGCATGGCTCTGTGTGAACTCTCGTTGTCTATAC
TTTGATCTTACGTTGACTACGGGTAAAAAAGACGCGCAGGAAGTGCCTGATAACATTACA
TTGGCTCCGTATGTTGATCTAATCAATCACTCGGTAGAGTCAGGACCCACCCACTGCCAA
CTCAAGACTAGCTCCATTGGCTTTGAGATTCTTTGCGGCCAGAGAGGATATACGGCGGAC
GAAGAAATCTTCTTATGCTACGGACCCCGATCAAACTCAGTGCTTTTGTGCGAGTACGGT
TTCACCGTTCCTGAAAACCCATGGGATGATGTCGATATCAGCGATGCATTGGAGAACACC
TTCTTGACCAAACAGCATGAGACTGTTCTCAGGGAGATGGGCTATTACGGCGAGTACACC
CTGTTGCCAGATTCTATATCGTTCCGTACCCAGGTTGCATTTGCAGCTATCCACTTTCTC
CAGTCAGCCGAACCCGCTAATGCACGACTGCTAAAGCTCTTTGTGGATGGAAAACTAGGC
ACACAGCGTTTCCAGAACACCATGAAGGCAGGCTTGAGGGATATTCTTACTACTTCAGCC
CAGGAGACAGAGGCTATTCTTGCGTCTTCTGCCAAACTACGATCCTGTGTGGAAATTTTG
CATCAGAGTCGGTTGAAGATTATCCAGTCGCTACTGGCGGACTTAACATCAATTGTCGGG
GCTACTTAGATCTTCACCTCAAAGCCACGGCGCTCCGTAACCAGCCGGAAGTAGCCTAAT
GAACATATGATACATGTATTTTTCATTGTTGCACTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20944g_CDS-001

Protein length: 403 aa.
Product: Conserved hypothetical protein

>YALI0F20944g_CDS-001 MENSHVQLIEWITSNGGYISPKLEIRELPGRGRGLVVNDRVYPNERLIHLKLRQLLNYSS
IHNAMVDGGHLSETEYRSMSAHQVLALFLVIQQSLGSKSDWKAFMGLLPDRKEGFLDVPL
QWSKEDQDSLTPEGIVVLKKTLDTFEADYDKTKTFVAKYDSDPRDAYLWAWLCVNSRCLY
FDLTLTTGKKDAQEVPDNITLAPYVDLINHSVESGPTHCQLKTSSIGFEILCGQRGYTAD
EEIFLCYGPRSNSVLLCEYGFTVPENPWDDVDISDALENTFLTKQHETVLREMGYYGEYT
LLPDSISFRTQVAFAAIHFLQSAEPANARLLKLFVDGKLGTQRFQNTMKAGLRDILTTSA
QETEAILASSAKLRSCVEILHQSRLKIIQSLLADLTSIVGAT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG