YALI0F20922g

Overview

Description weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
Locus type CDS
Locus tag YALI0F20922g

Location

Species Yarrowia lipolytica Positions 2783340..2785175
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1836 (nuc.)
Previous locus YALI0F20900g Next locus YALI0F20944g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20922g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20922gYALI0F20922g_mRNA-001YALI0F20922g_CDS-001

Nucleotide sequence

 

>YALI0F20922g
ATGCAGAGCTTCAAGCACTACCTACAAGTCGTATTCAACCCTCAGGTGGAGAGAGCCCAC
GACGAAGACGACACCAACGTCACTGACGGTGTCAAGGAGATGGAGCACCTGAACAAAATC
TTCTCCAAGACGGAGTTGGTCTTTGCATGGTGTTCACTCCTGTTAGTTTCTGTTTGCATT
GCTCTTGAATCTCAGACTGTTAACGTCTACTCGACCTTCGCTACTTCACATTTCAACGAG
CTTTCTCTTCTTTCAGCACTGGCAGTTGTCAAGTCTGTCATGTACACCGCCTCGCGACCC
ACTGTCGCCAAACTTGCAGATGTTCTAGGTCGATTTGAGGCTCTTGTTATTTCTGTGGTG
TTCTTCACAGTTGGGTTTATCATGTTAGCAGCCTGTCAGAACATTGGAACATATTTTGCC
GCTCATATCTTCTACGTCTCGGGCCAAGTAGGCATCCAGTTCATGGAGCAAGTGTTCGCG
GCAGACACTTCAAGCCTTAAGAACCGAATGTTCTTCGTTTCGCTTCCCAACTTTGCGTAT
CTCTTCGCCCCATGGATCGCTGCTCCTATTACAAACGCCATCACCAAGCATTCCACTTGG
AGATGGGGTTACGGAATGTGGTGCATTGTTATGCCAGTTGTGGCCATTCCTGTCTGTGGT
ATCATGCTACGGCTGAAGTTCAAGGCCCGAAGGCTGGGTCTCGAATACGGAAAGTCGGTG
CGAAACTTCAAAGAGACCATGCGACAGTTTGACTTCATCGGTTTGATTCTCTTCACTGGA
GGTCTGACTCTTTTGTTCTTAGCCGTCACACTTGCTACGGGTCCCAAGTCCTGGTCCCAG
GCACACATTCTTGCCATGATTGTCATTGGACCTATTCTCTTGGTGGTTTTCCCATTCTGG
GAAATGGTTCCCAAGTACCCCTTCATGCCCTTCTACATCATCAAGAACAGAACCATGTTC
ACCTGCTGCTTCCTCATCTGTTGCTACTCTATTGCATACTTCCTTTACGGAACCTATTAC
ATGCCCTGGCTTATGGTGTGTAAGAACTTGTCCGTCACTGCTGCCACCAACACTTCTGTA
TGTTTTGTTGTCGCTTCCACTGTCTCCTCCTTTGTGGGAGCTGCCTACACAAAGCTCACA
AACAAGGTCAAGCCAGTTGTTTGTGCTGGTGCAGCCATCTACCTGCTTGGTCTCGGTCTG
ACATACCACTACCGACAACCTCACCATCATCTTGGCCAGTTTATCGTTGCCCAGTGTGTG
GAGGGTGTAGGATCGGGCATGATGCAGATGCCCATGCTTGTCATGCTCCAGTCTGTGGTG
TCCCATAAGAATGTGGTTTCTTCCACAGCCATCTACCTGTCCATCATGACGGTTGGAACC
ATTATCGGGGAAGCTATTGCCGGCTCTATGTACCGACAATCCTACCCCAAACAGCTGGCC
ATTTTCGCCCCCTTCCTAACCCCTGCTCAGAACCATCTGGTTGCAAACAACATTGGAGCT
GCTCTCAAATACAAATGGCAGACACCAGAGCGAATGATGATTGTTACGGCCTTTAATGAC
GTCTACCGACGAATGCTATACCCGCCTATTATTGTGGCTTCCTTCATCTTCGTTGGAACC
CTGACTCTTCCTGACGTCAATGTCAGCCTGATGGATGATGCCCAGAACAACACCGACGGT
GAGAATGCTATGCCTCACATCAAGGGAGACTCGGAATCCGAGTCTATGGACGATGGCATG
GGCGTCCACCATGATTCTGAAGACATCGAAGCCCTTGCAGGAACCACTTCCTCCGAGGAG
GCCTCCTTCGGTGCTGAAGAAGAGAAAAAGATCTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20922g_CDS-001

Protein length: 612 aa.
Product: Conserved hypothetical protein

>YALI0F20922g_CDS-001 MQSFKHYLQVVFNPQVERAHDEDDTNVTDGVKEMEHLNKIFSKTELVFAWCSLLLVSVCI
ALESQTVNVYSTFATSHFNELSLLSALAVVKSVMYTASRPTVAKLADVLGRFEALVISVV
FFTVGFIMLAACQNIGTYFAAHIFYVSGQVGIQFMEQVFAADTSSLKNRMFFVSLPNFAY
LFAPWIAAPITNAITKHSTWRWGYGMWCIVMPVVAIPVCGIMLRLKFKARRLGLEYGKSV
RNFKETMRQFDFIGLILFTGGLTLLFLAVTLATGPKSWSQAHILAMIVIGPILLVVFPFW
EMVPKYPFMPFYIIKNRTMFTCCFLICCYSIAYFLYGTYYMPWLMVCKNLSVTAATNTSV
CFVVASTVSSFVGAAYTKLTNKVKPVVCAGAAIYLLGLGLTYHYRQPHHHLGQFIVAQCV
EGVGSGMMQMPMLVMLQSVVSHKNVVSSTAIYLSIMTVGTIIGEAIAGSMYRQSYPKQLA
IFAPFLTPAQNHLVANNIGAALKYKWQTPERMMIVTAFNDVYRRMLYPPIIVASFIFVGT
LTLPDVNVSLMDDAQNNTDGENAMPHIKGDSESESMDDGMGVHHDSEDIEALAGTTSSEE
ASFGAEEEKKI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG