YALI0F20878g

Overview

Description similar to uniprot|Q6BNU5 Debaryomyces hansenii DEHA0E19965g unknown function
Locus type CDS
Locus tag YALI0F20878g

Location

Species Yarrowia lipolytica Positions 2780077..2781870
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1794 (nuc.)
Previous locus YALI0F20856g Next locus YALI0F20900g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20878g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20878gYALI0F20878g_mRNA-001YALI0F20878g_CDS-001

Nucleotide sequence

 

>YALI0F20878g
ATGAACCGATTGCCCTCCCGCCTGGGCCGAATGCGGATGCCCGCTACGCGAAGCTACTCG
ATCTTCGCCCGAACGTCCTCCAAAAAGTCGCTGCCGAACCCCAAGGGTGAGCCCTCGGCA
GCACCTGATTCTGGCAAGACCGGCAAGAAACAGCCCTTTGTGCATGACTACTCGGTGCGA
CCCACGACTTACGTGTACCGAATGGAGGACAATGCGGAGTCGTTCAGCAAGTACCCTCTG
ATGACATCCAAGAAGCTGTCCAAGAGCTCCTCACGGCCCAGAGGAGTCCGAATGACCGCC
AAGGACTTCATGGACGACTCTCTTTACAACCCCTACTACGGCTACTTCTCCCGGAACGTG
GAGATTTTCACCACCGACAAACCGTTCGATTACACGAATATCAATGATGTGGACGACTTC
CTCAACACGTGGACCGGAGAGTACTCCAAATACGCAGCTAACAGCCCGACTTTGACGGGT
AAGACAAAAGATACGAGCCATTCGGGTACCTTTCCCGCTCAGGACAAGGACTTCACATCG
AGGGGCGCCTCGAAACAGCTGTGGCATACCCCCACCGAGCTGTTCAAGCCTTACTACGGA
GAGGCTCTGGCACGATACTTGCTGGTCAACTACAAGCTCTCGCTATACCCCTACAAGGAT
CTGATCATCTACGAAATGGGAGGAGGTAACGGTACGCTCATGACCAACATTCTCGACTAT
ATTCGAGATACTCAGCCCGAGGTATACGAGCGAACCCGATACAAGGTCATTGAGATTTCC
GACCAGCTGGCTCACAAGCAGCAGAGTGCTCTGCACACCAAGGCGTCCGAGACCGGTCAT
CGGTCCAAGGTCGAGATCATCAACAAGTCGATTTTTGATTGGAAGGAGCCCGTCAACGAC
CCCTGCTTCTTTGTCGCCCTCGAAGTTTTTGACAACTTTGCCCACGATATCGTCCGATAC
GATAACCGAACTTTGCAGCCCTACCAGGGTCATGTTCTGGTTGATGCCAATGGAGACTTC
CACGAGGTGTATACTCAGAAGCTCGACGAATGGACCAAGCTTTTCCTTCAGATCCGAACG
GAGGCTCTTGAGGACTACTCTCCCGATAGCAGACTCGGTTTCCATCCTCTGTCTACCCCT
TGGCTTTACAAAGAGGCCCGAAACCTCATGTGGCCCTTCCACTCTGAACTGTCTGACCCC
GAGTTCATCCCCACTCGATACCTCGAGTTCCTGTATATTCTCAAGAAGTACTTCCCCCAG
GCTAGATTGCTGTCTTCTGATTTCACACATCTGCCCGAGACCACCACTTCACGGTTCTCC
GGATACAACTCTCCTGTGGTTCAGACAGTGCTTGACAACCAGATGGTCACCACTAACACA
CATATGGTTCTGCAGGGTTACTTCGATATTCTCTTCCCCACCGACTTTGAGCTTGCTGCG
CAGCTTCTTCGTCACGTGTGTGGCAGAGTGCCTGAGATTTCTACCCATCAGGAGTTCTTG
GAACAATGGGCCGACCTTGATGCAACCACTACCAAGACCGGTGAGAACCCCATGACCAGT
TTCTACCGAAACGCTGCCTTCCTCACCAATTAAGAGGGGCTACAGTAATCACAAGGTTAT
GATTACTGCTAATAGTCACGAGGGAGTTCGGAGGGGGGAAAAAAACATCTGATCTGTAGC
TGTAGATGGGCTATATCTGGTAATATGGTGAATGCGTGACAGTCTGAAAATGCCAGCTCT
CCACATTATCAATGCATATATGTATATAGAAATTTAATTTGTCAGTTAAGCACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20878g_CDS-001

Protein length: 531 aa.
Product: Conserved hypothetical protein

>YALI0F20878g_CDS-001 MNRLPSRLGRMRMPATRSYSIFARTSSKKSLPNPKGEPSAAPDSGKTGKKQPFVHDYSVR
PTTYVYRMEDNAESFSKYPLMTSKKLSKSSSRPRGVRMTAKDFMDDSLYNPYYGYFSRNV
EIFTTDKPFDYTNINDVDDFLNTWTGEYSKYAANSPTLTGKTKDTSHSGTFPAQDKDFTS
RGASKQLWHTPTELFKPYYGEALARYLLVNYKLSLYPYKDLIIYEMGGGNGTLMTNILDY
IRDTQPEVYERTRYKVIEISDQLAHKQQSALHTKASETGHRSKVEIINKSIFDWKEPVND
PCFFVALEVFDNFAHDIVRYDNRTLQPYQGHVLVDANGDFHEVYTQKLDEWTKLFLQIRT
EALEDYSPDSRLGFHPLSTPWLYKEARNLMWPFHSELSDPEFIPTRYLEFLYILKKYFPQ
ARLLSSDFTHLPETTTSRFSGYNSPVVQTVLDNQMVTTNTHMVLQGYFDILFPTDFELAA
QLLRHVCGRVPEISTHQEFLEQWADLDATTTKTGENPMTSFYRNAAFLTN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG