YALI0F20680g

Overview

Description weakly similar to uniprot|Q6BLG1 Debaryomyces hansenii DEHA2F13728p
Locus type CDS
Locus tag YALI0F20680g

Location

Species Yarrowia lipolytica Positions 2756615..2758881
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2267 (nuc.)
Previous locus YALI0F20658g Next locus YALI0F20702g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20680g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20680gYALI0F20680g_mRNA-001YALI0F20680g_CDS-001

Nucleotide sequence

 

>YALI0F20680g
ATGCCCGACACCGTGACAGCCAAACCGTTACCAATCCCACAAATGTCGTCGGCTCACCAT
CTCCATCGATTCCCCAGCAACCAGAGCTTGACTTCTTTTCACAACGGTTCCAATGGCAGC
CTAACAAGTCCATTGAGTCCTACATCAACTCGGAGCCGACTACGGAACTCTCTCAATCTC
ACATTCATGAAGAGACGCCCTAGTAAGACTGACGATACTAAAATCCAGACTCCCCAGGAT
CAAATTTTCCATACCTCATACTCACAATCTCCTGGCCATGGTTACACTGACTCTGTCATG
TCTCCACCCAACTCGACATCCACCTGCTACACATCCCCACCTTACTCCAACCCTCCCAAA
AAGAAGACGCCAACCAAGAACAGCTTCGAGCCTTTCAACAGCGCACCGCCACCTGCCATC
AAGCCCTTTGTATTCTCTGGCAAGGTCCGTTTCGTAGAGAACGACAGCTGCGCCATCTGT
GAAGAGCCACTGCATTTCATTCTAGCTGGCGAGCGAAAGCTTGTGCTCGAGTGCAAACAC
ATTGCTCACGAACAGTGCTACATGGAGTTCCTCAGCGATGACGTGGTCTCACCAGACGAC
AAGGACCTCGTACCTCTCTGTCCTGTCTGTGGTGAAAAATCTAAGCCAATTGACGATTCA
CAATGGAACGATCTCTACCATGAAAGACTTCGAAAGGCTCGTCAGCTTGAACGAGAAGAT
GTAATCAATCAACTCATCAAGTCGTCTCCAGGAAAGGCGGCAGGAGGGGTAGATATTTTG
TTGTGGCCTCTGGCGAAGGAGAAGACTCCAGCAGTAGCCTGTTCGACTGTCAGACCAATC
GTCAGTGTACAGGTGAACAAGCAGCGCGGCACTCCCAAGCCCCCTGGGTTCTCTTACATG
AACCTCAAGATTGACGTCACTCCTGACGAGTACGATGGTGGTCGTGACTCTTTCATTCAC
TACCATGAACAGGTCTCTCCCAGAGATGGTCCCGAGAGACATGACCCTGTGCTGGATAAT
CTTGTGGCATCAGTTGCTGATTGGGGAAAACTTGACCCCAATACTGCTGGTTCCATCCGA
TGTGTCGATCTAATGGAGGTCTCTACGGACCAAGGCACAACCTACAAGTCGTTGGTTGGA
TTCCTGTTTGATGACCTTGTCCTGTTTGTGGAGAACTCTTATCCTGTGCGGCACCCCTCC
AAGACTCTTTTCCCGGGATCCGTCATCAAGGGTTCTCTTGTGATTTCAAAACACATTGCG
AGTGTGATCAATGGCAAGGACATGTCCATTTTCGTGCACTCCGTCAACTCTCCTGAATTG
AGAGTAAACATTCCTGGAAACCAAGATGAATGGTTCAACACCCTCGTCCACCTCTTCCGA
GGCAATCGCCACGGCGACTCTTTCCATAAACGGAGATGTGAGGCCACGCCTCCATTGTCT
TCGCCAATCAAGCTGGCCACGCCGGTAGATGCCCCCATAGATCTGGTAGTTGTCGTTCCT
ATCGGGTCTTGTAACGATACTCAAATCAAGATGCTTCAGAAGACCATCCGAGGGATCTTG
GCATGTATGTCACATCTTGACCGTTTGTCTCTGCTTCTTGTCGGTTGTGGTCCCGACGAA
AACTCCACCTATGGAGCAAGCAACAATACTGAGTACATCGCTCTGGGTCTTGCCTCTCCT
GAATGGCCAGGCTGGGACCACAGCATCAACTCTCTCAATGACCCTTCTGTACGCGGAGGT
GGAACCAAAAAGGTCACTCTCGAGGCCTGGGCTCACGCCCAACGTCTTCTGGCGACTAGA
GAGTCTAAAAACGCTACCTGCTCCATCTTCATGATTTCAGAGACACGACTCGTTCCCAAC
CAAGAGATGTCCAACCCCTCATCTCCCACCAAGGTATTCACTTTGAATCAGCTTGACAGA
ATTGACGACGAGATCCGAAAATGCAAGAAGCGACGTATTGGATACGCCAAGCTATTGGTC
GAAACTGAGCACGACACCATTGTTCAGATTTACGACTCACAAGAGGCCGATTCCCATCAG
AGTGCCAATGGGAGACATGCTATATTTACATTCCCCTTGTATTTCGGCAAGACAGATCTT
AACTTGGCTATTAGAGGAGTTCCACCGTCCAAGTTTACTCTCTTATCTTGTGAGGGACAG
TTTGAAACCACAGAGTGCTTTGTATTCCAACAGCACTCTTGACCATAATGTGATATTAAC
ACAGTGTGATGATTATTTATTGACTAATACATTCTTTAAAGATATTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20680g_CDS-001

Protein length: 734 aa.
Product: Conserved hypothetical protein

>YALI0F20680g_CDS-001 MPDTVTAKPLPIPQMSSAHHLHRFPSNQSLTSFHNGSNGSLTSPLSPTSTRSRLRNSLNL
TFMKRRPSKTDDTKIQTPQDQIFHTSYSQSPGHGYTDSVMSPPNSTSTCYTSPPYSNPPK
KKTPTKNSFEPFNSAPPPAIKPFVFSGKVRFVENDSCAICEEPLHFILAGERKLVLECKH
IAHEQCYMEFLSDDVVSPDDKDLVPLCPVCGEKSKPIDDSQWNDLYHERLRKARQLERED
VINQLIKSSPGKAAGGVDILLWPLAKEKTPAVACSTVRPIVSVQVNKQRGTPKPPGFSYM
NLKIDVTPDEYDGGRDSFIHYHEQVSPRDGPERHDPVLDNLVASVADWGKLDPNTAGSIR
CVDLMEVSTDQGTTYKSLVGFLFDDLVLFVENSYPVRHPSKTLFPGSVIKGSLVISKHIA
SVINGKDMSIFVHSVNSPELRVNIPGNQDEWFNTLVHLFRGNRHGDSFHKRRCEATPPLS
SPIKLATPVDAPIDLVVVVPIGSCNDTQIKMLQKTIRGILACMSHLDRLSLLLVGCGPDE
NSTYGASNNTEYIALGLASPEWPGWDHSINSLNDPSVRGGGTKKVTLEAWAHAQRLLATR
ESKNATCSIFMISETRLVPNQEMSNPSSPTKVFTLNQLDRIDDEIRKCKKRRIGYAKLLV
ETEHDTIVQIYDSQEADSHQSANGRHAIFTFPLYFGKTDLNLAIRGVPPSKFTLLSCEGQ
FETTECFVFQQHS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG