YALI0F20658g

Overview

Description similar to uniprot|Q06706 Saccharomyces cerevisiae YLR384c IKI3 confers sensitivity to killer toxin
Locus type CDS
Locus tag YALI0F20658g

Location

Species Yarrowia lipolytica Positions 2752996..2756494
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3499 (nuc.)
Previous locus YALI0F20636g Next locus YALI0F20680g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20658g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20658gYALI0F20658g_mRNA-001YALI0F20658g_CDS-001

Nucleotide sequence

 

>YALI0F20658g
ATGAGAAACCTCCAATGTGTACACCGGGGTATTATCAAACCCGAATCAGTGGAGGCACCT
GATCTCAACCTGGTCAAGACCATTTATGACCCTCTTTCAGACGCCATGGTCTTCGTCTTC
GACGGCTTAGACACCGTTGAGGTTCAGCAGTTCTCAAAAACCGAAGGTACACAGGTATGG
GCAAACTTCCCCGTCAGTGGCCACGTCCTTGCATGCGACTTTTTGTGGGAGTCGCAGACG
TGTGTCATCTTCCTCAGTGACGGAAACGTTTACAGTGTGGAGCAGGGAGATCAGGTCATC
AACCTGGGAGAAATGGAGGGAGTGGAGAGTGCAGCATGGTCCCCCGACCAGCAAGTAGTT
GCTCTGGGAGCCAAAGACAAGGTCCTTGTTCTGTCTAGAACTTTCGATCCGCTCTCAGAG
ACTCCTGTTTCAGTGGACGACCTCAAACTGTCCAGACATGTCAGTGTTGGATGGGGTTCT
GCAGACACCCAGTTCCGAGGACGAGGAGCCAAGAGAGATCCCACAGTGCCTGAGCATGTC
GATATTGGTCACGTGACTGAATCAGATGAGTCCAACATTACTCTCTGCTGGAGACCTGAT
GGAGAGTGGCTTGCCCAGTCCTCCTGTGACGATGTAGAGGGAGGTAAGCGACGAGTCGTG
CGAGTTTACTCTCGAGATGGTCAGCTCTTTTCTGTCTCTGAGCCTGTTGATGGTCTTCTT
GATCTTGTTGCTTGGGGAACTTCCCTTATCGCTTGTGTTGCCAAGCAAGAGGTTGTTTTC
TTTGAGCGAAATGGTCTCCGACATGGAGGGTTCCACATTGGCGACTTTGTCCCTATTGGC
ATGCAATGGAACTCTACGGGTGAGATTCTGGCCCTGTGGTCCCATGAAACGGTTCGACTC
TATACTACAAAGAACTACAGATGGTACCTGAAACAAGAGGTCGTTTCTCGGCTTCCCGGA
AACCCCAAGACCCTCACTTGGCACCCCGAGAAGCCCCGAACCATCATCATCAACTATGAC
GATCACGTTGAGATCCACGAATACACAGACACTGTCACTAGCGAGCCTGTTAACGGAGTC
ACTTGCGTCATTGATGGAAAGCTGCTTCTTGTGACACCTCTGAAACTGGCCTGTGTTCCC
CCTCCAATGTCTAGAGACGAGATCCACATGGAGGAGAACATCGTTGCCGTTTCTTCTTCC
GCATCACACATTGCCGTTCTCACAAGAGAGGCTGTGTATATATACGACTCTTTGACAGTG
ACCCACGTCACTACACACAGGCTTGACTTGAATAACGAGACTGTCAAGGCGGTTGTTATT
CACGGAGAAGTGCCTTACGTTCTGGCTGAGTCAGCATCTGCCTCCAGAGTCATTACCCCT
GCGAAGAGCTTTCCTCTCCATTCCGACTGCATTGCCTTTGCCAAGAGCCACAAGGCTCCT
TTGCTTCAGCTTCTCGACGGATACGTCTATCTTCTACAAGACACTCTTGAACCTCTCGCC
AAACTCCCTCGATGTAGCACTATCGCTTACACTGACGAGATCTACGGACTGACCAGCAAG
GGTAAGCTCTATAAGGGCGATCAGGTGGAGGCAAGTCACGTGACTTCTCTGCTTTCTTCC
GACGATACCTTACTATATACGACAGCTGAGCGGCTCTATCTCGCGGGTGAGTCGAGAGAG
ATTGAAAAGTCGTCCCTGCTGGTGTCTGTGCATCCTTCCACTTACTCTGTTGTTCTACAG
GCTCCTCGCGGCAACCTTGAGACTATCCATCCTCGTCCACTTGTGCTGAAACGAGTTTCT
GAGGCTCTTAAGAATCGAGACTTTAAGGCTGCTCTGACCATCTGTCGAACCCACCGAGTT
GACCTCAACTTCCTGCATGATCATGATTCTGAGCTGTTCATGACTCACGTCAGCGAGTTT
GTTGACCAGGTATCTTCCAATCATCTGGATCTGTTCCTCACCGAAGTTGGAGTCAAGAAC
AACCCCAAGGGCAACGAGATCTGTGACGCTGTTCTCACTAACACTAAGAACCTGCTAAAC
CAGATCACCGCACACAGCTTCAAAAACCCCCCAGATGTGGCCGCTGCCCTGGCCCTGGTT
GACTCGGAAGAATCACTGGAACATCTGTGTTTCTTGCATGATGTCAACCACCTCTACGAT
ACTTCTCTGGGACTCTACGATCTGGAGAAGACTCTACTTGTCGCACAGCAGAGTCAGAAG
GATCCTAAGGAATACCTTCCTTTTCTTCAGAAGCTGCAGGTTATGTCCGAGGACCGTCGA
AAGTTCACTATTGACGATCATCTCGAGAAGTATGCCAAGGCTCTTGAGAGTCTTATCGCA
GACAAGGCCGAGCACGAAGAAATCGACACCTACATTACCCGACATGTTCTGTACAATGAG
GCTCTGAAGCTATACACTGACAAGAGCGATACTCAGCGGGTGCTCAATATTTACGCAGCG
TTTTTGGAGTCCACTCGAGAGTACAAGGAGGCTGGTATTATCTACGAATCTCTCGAGAAG
TGGGAGGAGGCTCTGGAAGCATACAAGGCTGGTGTCTACTGGGAAGAGGCTTTGTGCCTA
TGCCATGCTGTTGAAGGGTTCGAAGACCGAGTCCGAGACGTTGCAGATGAGCTGGCTCCT
CAGCTTGTTTCCGCCCATTGCTACAAGGAGGCCTCTACCCTTTATGCGGACTACCTTGGT
GACATTATGGAGGCTGTTAGATGCCTGTGTCTGGGCTCCAACTTTGTTGCCGCCCGTGCT
CTTGCTGCTCGAAAGGCTGGTGGTGAAAAGCAGAGAATCTTTCGGGAGATTGACAGTCTC
CTCAGCGATGCGTTTGGTACTCACTCAGAGTTTCTGGCTGACTGTCAGACCCAGGTAAAG
AACCAGGTGTCCCGACTTCACGAGGTTCGACAGCTTGCTCAGGTCAGCATGTCTCGAGAA
CTCGAGCGCTTGGAAGATGATAACATGGTTCCCGACGATATATCTCTGGCTGACACTGCT
TCTACCTCTGGAACCTTCCTGACCAAATACACTGGTAAGACTGCCGGTACTGCCAAGACC
GGCGTGTCTCGACGAACAGCCAAGAACAAGCGACGAATGGACCGAAAGAAGGCCAAGGGT
AAGAAGGGTACTGTGTTCGAGGAGGAGTATCTGGTTGCCAGTCTGGGACGCCTGGTGGAG
CGGTTAGAGCAGTCTAAGGTGGAGATTTACAACGTGATCCAGGCTCTGTATTCTCGTGAC
CGAAGACCTTTGGCCCATCAATTGCAGCAGTCGCTCGTCGCGCTCGCTGCAAGCTTGACC
GAAAACGTCCAGTTTGTGTTCAACCGAACCATGGAGGATCGGAAGCGAATCGACGACGAT
GGCGCTGTCTACTATCTGGATGAGGTTCCTGTTCCCGAAATTAAAAAGGTGGAGGTTTTT
GCTTCTCTCTAAAACTTTTGAAGATACGTAAGAATAGAGTGAACAGTATTTCAATGAATA
TGGTATAATACAGTAGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20658g_CDS-001

Protein length: 1144 aa.
Product: Subunit of Elongator complex, putative

>YALI0F20658g_CDS-001 MRNLQCVHRGIIKPESVEAPDLNLVKTIYDPLSDAMVFVFDGLDTVEVQQFSKTEGTQVW
ANFPVSGHVLACDFLWESQTCVIFLSDGNVYSVEQGDQVINLGEMEGVESAAWSPDQQVV
ALGAKDKVLVLSRTFDPLSETPVSVDDLKLSRHVSVGWGSADTQFRGRGAKRDPTVPEHV
DIGHVTESDESNITLCWRPDGEWLAQSSCDDVEGGKRRVVRVYSRDGQLFSVSEPVDGLL
DLVAWGTSLIACVAKQEVVFFERNGLRHGGFHIGDFVPIGMQWNSTGEILALWSHETVRL
YTTKNYRWYLKQEVVSRLPGNPKTLTWHPEKPRTIIINYDDHVEIHEYTDTVTSEPVNGV
TCVIDGKLLLVTPLKLACVPPPMSRDEIHMEENIVAVSSSASHIAVLTREAVYIYDSLTV
THVTTHRLDLNNETVKAVVIHGEVPYVLAESASASRVITPAKSFPLHSDCIAFAKSHKAP
LLQLLDGYVYLLQDTLEPLAKLPRCSTIAYTDEIYGLTSKGKLYKGDQVEASHVTSLLSS
DDTLLYTTAERLYLAGESREIEKSSLLVSVHPSTYSVVLQAPRGNLETIHPRPLVLKRVS
EALKNRDFKAALTICRTHRVDLNFLHDHDSELFMTHVSEFVDQVSSNHLDLFLTEVGVKN
NPKGNEICDAVLTNTKNLLNQITAHSFKNPPDVAAALALVDSEESLEHLCFLHDVNHLYD
TSLGLYDLEKTLLVAQQSQKDPKEYLPFLQKLQVMSEDRRKFTIDDHLEKYAKALESLIA
DKAEHEEIDTYITRHVLYNEALKLYTDKSDTQRVLNIYAAFLESTREYKEAGIIYESLEK
WEEALEAYKAGVYWEEALCLCHAVEGFEDRVRDVADELAPQLVSAHCYKEASTLYADYLG
DIMEAVRCLCLGSNFVAARALAARKAGGEKQRIFREIDSLLSDAFGTHSEFLADCQTQVK
NQVSRLHEVRQLAQVSMSRELERLEDDNMVPDDISLADTASTSGTFLTKYTGKTAGTAKT
GVSRRTAKNKRRMDRKKAKGKKGTVFEEEYLVASLGRLVERLEQSKVEIYNVIQALYSRD
RRPLAHQLQQSLVALAASLTENVQFVFNRTMEDRKRIDDDGAVYYLDEVPVPEIKKVEVF
ASL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG