YALI0F20570g

Overview

Description similar to uniprot|P36051 Saccharomyces cerevisiae YKL165c MCD4 sporulation protein
Locus type CDS
Locus tag YALI0F20570g

Location

Species Yarrowia lipolytica Positions 2737421..2740298
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2878 (nuc.)
Previous locus YALI0F20548g Next locus YALI0F20592g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20570g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20570gYALI0F20570g_mRNA-001YALI0F20570g_CDS-001

Nucleotide sequence

 

>YALI0F20570g
ATGATATCGCTCAACAAGAAGCTGGTGCTGCTGGTGGGAGTCATTTTCCATGTGGCCTTC
ATGTGGTCAATCTTCGACATCTACTTTGTGTCGCCCTTGATCCATGGCATGAAGCATCAC
CAGAGTACCGCTACTCCGCCTGCCAAGCGGCTGTTCCTCATTGTGGGAGACGGTCTGAGA
GCCGACAAGGCCTTTGAGAAGGTGCGACATCCCACAACTGGCGAGTCCGAGTACCTGGCT
CCTTTTTTGCGTTCAAAGGTCATGTCCGACGCGACTTTTGGCATCTCACACACCCGAATG
CCCACAGAAAGTCGTCCTGGCCATGTGGCGCTCATTGCAGGCTTCTACGAGGACGTGAGT
GCCGTCACAAAGGGATGGAAGGAAAACCCTGTGGACTTTGACTCCGTTTTCAACCAGTCC
AGACACACTTACTCGCTTGGATCTCCCGATATCTTGCCCATGTTCAAGCATGGAGCCGAG
GATCAATCGCGAATTGATGCTATCATGTATGGCCACGACTTTGAGGATTTCACAAAGGGT
TCTATTGAGCTTGACGCGTTCGTTTTCGACCACCTGGACGAGATCTTCGATAAATCCAAG
ACCAACAAGACTCTGGACGACCAATTGAGATCCGACAAGACCGTCTTCTTCCTGCATCTG
CTTGGAATCGACACTGCTGGTCATTCTTACCGACCCTACTCGGCTGAGTATTACGATAAC
ATCAAGTACATTGATGAGAACATCGAGAAGTTGGTGGACAAGGTGAACAAGTTCTACAAC
GATGACGAACAGACCGCTTGGGTGTTTACGGCCGATCACGGCATGTCCGATTGGGGTTCA
CACGGTGACGGTCACCCTGATAACACTCGAACTCCTCTCATCGCTTGGGGAGCTGGAGTT
AACAAGCCAATCCCCGCCTTCGAAGACAAGGGTAATCACGACGACTACTCAGAGGTCTGG
GATCTGCCTGTCAAGCGAAATGACGTCAACCAGGCTGATATCGCCTCTCTTATGTCGTAC
CTTGTGGGTCTCAACTACCCCTCTAACTCTGTCGGAGAGCTTCCTCTGGCTTTTGTGAAC
GCTACTTCTGAGACCAAGGCTCTGGCTATCCGAAACAACGCTCTTGCTCTTGTGGAGCAG
TACCTAGTCAAGGAAGAGCAGCAGAAGGGTTCCCAGATCATTTTCAAGCCTTACCCTCCC
CTCTCTGATGCTGGAAAGACCATCGATGAGAGACTGGCCCATATCGACGAGCTGATTGCC
CAGGGACTCGACCAGGAGTCGATTGTTGCCTCTGAGGAACTCATGACATATGCCATCACC
GGCCTTAAGTACCTTCAGACCTACAATTGGCTGTTCCTGCGAACCCTGGTGACCATAGGC
TTCTTTGGATGGATTGCTGTTGCCTTCTGCTCTTACCTGCTTGCCTTCGTGGTTCAGTCC
GACAAGCCTTTTACCACGTCTCTTCCTCTCAAGGGAGTTGCCTACGTTGCCCTGGCCATT
CTTTCAGGCTTCTTCGTTTTCCAGAAGTCTCCTCTCCACTACCACCTCTACGCTGTCTTT
CCTGTTGTCTTCTGGGAGGCTGTCTTGCAGAGGCGAACTGCTGTTGCCGAGGGTATCTCC
ATTCTGGCACGACGATCTACCTCTAAGGCTCCAGCTCTTGCTGCTATTTTGGACATTGGT
CTCTCTCTTGTTCTCCTTGAGGCCATTGTTTACGGGTACTTCCACCGAGAGATATTCTCT
GTTTGTTTCGGACTCGCTACTCTGTGGCCCTTTGTGCACAACTTCACTGTTGCCAAGCGA
GAATGGCCCACTACTCTTGCCTGGGTTGTCATGTGCGCAATCATGTCTTCCTTCACACTT
CTGGAGGTCGTGAAGGTGGAGTCTATTGAGCAGATTCTGCTTTCTGGTGCCCTCATGCTG
GTCATTGGACTGGTGTTCACTATTCATCTGCAGCGAAAACTTGCTCTTGCGGCCTCCACT
GTTTGCGTTCTCTTTGCTCAGATCCTTCTCGTTGTTGCAACCATGTACTTCACTCGAGAG
TCCGTTGAGTCTCTTACTGCTCGAAACGGTCTTCCTCTGTTTTCTCAGGTTGGAGGATGG
ATCTCTCTTCTTCTCTCCCTTGCAGTGCCCTTCTTACACTTCCTGGGATCTGATGCCAAG
GACTACAGACTGCGTCTGCTCATCATCTTCCTGGCATTTGGACCTACCTTTGTCATCCTC
ACCATCTCGTGGGAGGGATTCTTCTACGTCTGTTTCTTTGCTATCCTTGTCATCTGGATT
GAGCTTGAGACTCAAATGCGAGATGCCCGAGTGACACCCCAGACCCGGGCTGATCTTACT
CCTGGTGACTTCCGAATGGCTTTGTTCACCTTCTTCATGTCCCAGATTGGTTTCTTCGGT
ATTGGAAACATTGCCTCCATTTCGTCTTTCTCTCTGGACTCTGTGTACCGATTGATTCCT
GTATTTGACCCCTTCTCCATGGGTGCTCTGCTCATGTTCAAGATCTTGGTGCCGTTTGCT
GTCCTATCTGCATGTCTGGGCATCTTGAACCTGAAGCTTGGAGTTCCTCCTTCGGCGCTG
TTCTCCATGGTCTTGTGTGTCTCCGACATTCTGACACTCAACTTCTTCTATCTGGTTGTC
GATGAGGGCTCATGGCTCGACATTGGCACTGGTATTTCACACTACTGTATCGCCAGTGGT
CTCAGTCTGTTCATGATGGTGTTAGAGTACCTCTCTGGCGTTTTAGTTGCTGGAGTGACC
ATCGCACCGCACGTTTCCAAGATCAAGAAGGACATGTAAATAGAGTCCGGGGTTTTGGAT
AGCAACAAACACAAAAAATGAACACAACGTATAACAAATATATATTATTAGAGTATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20570g_CDS-001

Protein length: 933 aa.
Product: Protein involved in GPI anchor synthesis, putative

>YALI0F20570g_CDS-001 MISLNKKLVLLVGVIFHVAFMWSIFDIYFVSPLIHGMKHHQSTATPPAKRLFLIVGDGLR
ADKAFEKVRHPTTGESEYLAPFLRSKVMSDATFGISHTRMPTESRPGHVALIAGFYEDVS
AVTKGWKENPVDFDSVFNQSRHTYSLGSPDILPMFKHGAEDQSRIDAIMYGHDFEDFTKG
SIELDAFVFDHLDEIFDKSKTNKTLDDQLRSDKTVFFLHLLGIDTAGHSYRPYSAEYYDN
IKYIDENIEKLVDKVNKFYNDDEQTAWVFTADHGMSDWGSHGDGHPDNTRTPLIAWGAGV
NKPIPAFEDKGNHDDYSEVWDLPVKRNDVNQADIASLMSYLVGLNYPSNSVGELPLAFVN
ATSETKALAIRNNALALVEQYLVKEEQQKGSQIIFKPYPPLSDAGKTIDERLAHIDELIA
QGLDQESIVASEELMTYAITGLKYLQTYNWLFLRTLVTIGFFGWIAVAFCSYLLAFVVQS
DKPFTTSLPLKGVAYVALAILSGFFVFQKSPLHYHLYAVFPVVFWEAVLQRRTAVAEGIS
ILARRSTSKAPALAAILDIGLSLVLLEAIVYGYFHREIFSVCFGLATLWPFVHNFTVAKR
EWPTTLAWVVMCAIMSSFTLLEVVKVESIEQILLSGALMLVIGLVFTIHLQRKLALAAST
VCVLFAQILLVVATMYFTRESVESLTARNGLPLFSQVGGWISLLLSLAVPFLHFLGSDAK
DYRLRLLIIFLAFGPTFVILTISWEGFFYVCFFAILVIWIELETQMRDARVTPQTRADLT
PGDFRMALFTFFMSQIGFFGIGNIASISSFSLDSVYRLIPVFDPFSMGALLMFKILVPFA
VLSACLGILNLKLGVPPSALFSMVLCVSDILTLNFFYLVVDEGSWLDIGTGISHYCIASG
LSLFMMVLEYLSGVLVAGVTIAPHVSKIKKDM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG