YALI0F20548g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F20548g

Location

Species Yarrowia lipolytica Positions 2735815..2736489
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 675 (nuc.)
Previous locus YALI0F20526g Next locus YALI0F20570g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20548g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20548gYALI0F20548g_mRNA-001YALI0F20548g_CDS-001

Nucleotide sequence

 

>YALI0F20548g
ATGTCGTCAGTCAACTCAGTGGCCCCCATCCATCCCGTTAACACCATCATCACCCCTGGT
GCCATCAATGTCACTACTACAGCCTCTGTGGTGACCTCCACCGTCGCAGCTGGAAATGGC
TCCACAGACTCCTCCGTCTCTCACATCCACCCCATTCGAACATATATCACCCCTCAGAGC
GGATCTGAGGCTGCCAGCAACAAGGAGGTGTCCAACGGCGGCTCTGCTTCCGGTCTGGCC
TCTGCTACCGCTTCTTCTGGAGCCGCCTCTTCTGGAAGAGCAGCTACGGCTGACTCTACC
TCGGCTCCATCCAATTCCAAGTCTGACGCCGCATCTTCGGCCTCCCCTGCCTCGTCTGCC
CCTGCCAATGCCAACGGAGCCACCTCTCTGGCCGTTGCTGGAACAGTGGTCATGGTTGGT
TTCGCAGCTCTGCTTTTTTAAGAGTCTACAGCACGTGAACTATGCCGACTAAAGTTGAAA
CAGTTCGACTAGCTAATGATTGTCACTCATTGTATCAAGAAATGATATACGCACGTGTTT
TATTGTGAAAGGCATACATTCTCGCCCTCGCTGTCCAAGTACACCATCGTCTTACAAGCA
AGTCCCGTTGTCACAGGCCCACGCTCCTTTGCATAATTTATCTCTTCAATATTCAATTTA
ATATTCATTTATTCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20548g_CDS-001

Protein length: 147 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F20548g_CDS-001 MSSVNSVAPIHPVNTIITPGAINVTTTASVVTSTVAAGNGSTDSSVSHIHPIRTYITPQS
GSEAASNKEVSNGGSASGLASATASSGAASSGRAATADSTSAPSNSKSDAASSASPASSA
PANANGATSLAVAGTVVMVGFAALLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG