YALI0F19404g

Overview

Description similar to uniprot|Q01941 Pichia pastoris DNA polymerase gamma (Mitochondrial DNA polymerase catalytic subunit)
Locus type CDS
Locus tag YALI0F19404g

Location

Species Yarrowia lipolytica Positions 2587670..2590837
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3168 (nuc.)
Previous locus YALI0F19382g Next locus YALI0F19426g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19404g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19404gYALI0F19404g_mRNA-001YALI0F19404g_CDS-001

Nucleotide sequence

 

>YALI0F19404g
ATGAAACAAGGGAACGTTGAGGTTGACTCTGAAGGACGACGAATCAACCCCATGGGGATT
CAGATGTTGTCTTCAGGTTTGTACAACCAGCTTTTCGGGGACTACAACCAGACTAACTCC
TTGACCAAGCCTGAGATGGTTAAGTTGGAGGCTATGGCCAAGCATCATCTGATGAAACAC
GAACTACTGGGCAAGAAGACCAAGAAGGAAAACATCATCGATTTCGACTTGCCTCCAATG
CTTGGATCCAGTCTGGACGAGCATTTCTATCGAATGGCTAAAGTTATGGGGGAACCCTAC
ATGGATATTATCCAGGGCATGATGACCAAGGAGTTCCCTGCCAAACCTAGGCCCAGGGAC
GTGAAGACAGATATCAGTGGATGGATGAGATACGCCAAGGGGAAGAAACCAGAGCGAGTA
GATTACCCCAAAGAAAACGGCCTGGTCTTTGATATCGAGGTGCTCTACAAGGTGAGTGGA
TACCCTGTGATGGCAAGCGCCGTGAGTACTGAGGCCTGGTATGTCTGGCTCAGTCCCTGG
CTGGTGGAGTCACGCGAAACTGGCGTGGATGTGGAGGAAAAGACCAAGAGTCTAGATGGG
GAAAACCTGATTGTCAACCATCCCCAGGAATCAATGCATCTTATCCCCCTGGGTCCACCG
GATGAACCTCGGGTGATTGTGGGACACAATATTGGCTACGACCGTCAAGCAGTCAAGGAA
GAGTACTCCCTTAAGCAGACGAAAAACTTTTTCATGGATACTCTGTCACTGCATGTTTCT
GTCAACGGCATGTGTTCTCGACAACGAGGAACGTGGATGAAGGCTCGAAAGGGCCAGAAA
CGTATGAAGAAGCTGTTGGATGATGAGGATCTGAGTAACGAGGAGAACGTTAACGAGCTG
CTGGATATCTCAGACGATCTTGCAGATGCTTACTCTGAGGACCCCTGGGTCATGGTTTCT
GCCACAAATTCGCTAGCTGAAGTGGCTCATTTGCATTTGAACGGACTCGTCATGTCTAAG
GATGACCGTGAGCTTTTCAGTCAAGAATCGTTGGGTGAGCTGCAGCAGCGTGTCAAGCAG
GCTATTGACTACAATATCACTGATGTAGAAATCACCGCACAGGTGTTCAAGAAGATTCTT
CCGCTGTTCCTCGATACGTGCCCCCATCCCGTCAGTTTCACGGCATTGAAGAACATCTCT
TCGGCAATCCTACCCACAGACTCAGAGTGGAAAGACTACCTTAACCGGTGCGAAAACATG
TACCAGAAGATGAAGAAATCTATTGACGAAGGTCTCCAGTCTTTGGTTACTGAAGCAGTC
AAGCTCAAGGATGAGGCTGATAAGGAGCCCTGGCTCAACGATCCTTGGCTGTCGCAGCTG
GACTGGACTATTAAGCCCATCAAGATGGTGAAGATTCCTGCCAAGCAAGGAGGAGGTGAA
CGGCTTCCAAAGAACGTCAAGTTCCCCGGTTACCCTGAATGGTACAAGGCCTTGTTCAAG
TCGTCTGCTGGACCTATGCATATCACCACAAAGACACGAATCACTCCGTTGTTGCTGCGT
TTGAAATGGGAAGGTTACCCTGTTGTTTGGAGTGACAAGGAAGGCTGGATGTTCCGAGTT
CCTGTTTCTGAGCAGGCTCATTTCGAGGCCAAGAAGTACAAACTGGCCACTCTCGATACA
GAGCCGCATCTTCGAGATGATGGCTCGACCCTGTGTTTCAGAATTCCTCATAAGGATGGC
GGTAACACTCGAACCACACAGCTCATGGGCAAGTCCTTCCTGGGACACTTTGAGAAGGGG
ACCCTGAGCTCAGACAACCCCCAGACCAAGGAGATGTTCGAGATGTCTGTCTGCTCCTCT
TACTGGGTGTCCAACCGGTCTCGAATCATGTCTCAGCACTGCATCTGGGACGGGGATGGT
GTGGATATGGGCCGTGGTCCTGGATTTGGAATTATCATTCCCAGAATCATTCCCATGGGC
ACCATCACCCGACGATGTGTTGAGAATACTTGGCTGACAGCCTCCAACGCCAAGAAGAAT
CGAATCGGATCCGAACTCAAGTCTATGATCAAGGCTCCTCCGGGCTACTCCTTTGTGGGA
GCAGATGTGGACTCCGAGGAGCTGTGGATTGCTTCTCTCTACGGCGACTCTTGTTTTAAA
AACCACGGCTCCACCGCCATTGGCTGGATGACTCTGGAGGGCACAAAGTCCGAAGGCACC
GACCTTCATTCCAAGACAGCCTCGATTCTAGGAATTTCTCGAAACGAGGCCAAAATCTTC
AACTACGGCCGTATCTACGGAGCAGGTCTCAAGTTTGCCGAAGCGCTTCTCAAGCAGTTT
TCTCCCAATGTCACAGATGCCGAAGCTTCCACGCTTGCAGGCCAGCTCTACACTTCTACC
AAGGGTAAGAAGATCTACTCGATTGGTAAGTACTCTGGAGGAACCGAGAGTATTCTTTTC
AACAAGCTCGAAGAGATTGCCACCCAGGATATGCCCGAGACTCCTGTTCTGGGAGCCGTC
ATCACCAAGGCTCTCTCCTCTCAGAACCTCAAGAAGTCATCGTTCATGACCTCTCGAGTC
AACTGGACCATCCAGTCGTCAGGTGTCGACTACCTGCACATGCTTGTAGTTTCCATGGAG
TACCTTGCAGCCAAGTATGACATTGACATGCGACTCTGTATCACTGTGCATGACGAGCTG
CGATTCCTGGTCAAGAACGAAGATGCCTACCGAGCTGCCATGGCTCTGCAAGTGTCCAAC
ATCTGGACTCGAGGCATGTTCTGTCAGCAATCTGGTATTGATGACATTCCCCAGGGCTGT
GCTTTCTTCTCCGCCGTGGATATCGACCACGTGCTTCGAAAAGAGGTGGACTTTGACTGC
ATCACTCCAACCCACCCAGATCCTATCCCCCACGGAGAGAGTCTGGATATCGAAGGCCTG
CTGGCCCGTAAAGACGCCCGGTTGGAGGATGCCACTCACGTGATTGATCACTCTATTGAC
AAAAAGGCTCAAAAATTCCCCTACACAAGCCGAACCCCAGTGCTGGCGGCTCTTGAATCT
AACCCCTCAAAGGTGATCTCTTCTTTACTGGATCAGATTGGCGGAGACAAGAGAGCGATC
AGAAAGCTAAGCAAATTGTAATTATAGAAATGTATTTATTAATCAAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19404g_CDS-001

Protein length: 1047 aa.
Product: DNA polymerase gamma, putative

>YALI0F19404g_CDS-001 MKQGNVEVDSEGRRINPMGIQMLSSGLYNQLFGDYNQTNSLTKPEMVKLEAMAKHHLMKH
ELLGKKTKKENIIDFDLPPMLGSSLDEHFYRMAKVMGEPYMDIIQGMMTKEFPAKPRPRD
VKTDISGWMRYAKGKKPERVDYPKENGLVFDIEVLYKVSGYPVMASAVSTEAWYVWLSPW
LVESRETGVDVEEKTKSLDGENLIVNHPQESMHLIPLGPPDEPRVIVGHNIGYDRQAVKE
EYSLKQTKNFFMDTLSLHVSVNGMCSRQRGTWMKARKGQKRMKKLLDDEDLSNEENVNEL
LDISDDLADAYSEDPWVMVSATNSLAEVAHLHLNGLVMSKDDRELFSQESLGELQQRVKQ
AIDYNITDVEITAQVFKKILPLFLDTCPHPVSFTALKNISSAILPTDSEWKDYLNRCENM
YQKMKKSIDEGLQSLVTEAVKLKDEADKEPWLNDPWLSQLDWTIKPIKMVKIPAKQGGGE
RLPKNVKFPGYPEWYKALFKSSAGPMHITTKTRITPLLLRLKWEGYPVVWSDKEGWMFRV
PVSEQAHFEAKKYKLATLDTEPHLRDDGSTLCFRIPHKDGGNTRTTQLMGKSFLGHFEKG
TLSSDNPQTKEMFEMSVCSSYWVSNRSRIMSQHCIWDGDGVDMGRGPGFGIIIPRIIPMG
TITRRCVENTWLTASNAKKNRIGSELKSMIKAPPGYSFVGADVDSEELWIASLYGDSCFK
NHGSTAIGWMTLEGTKSEGTDLHSKTASILGISRNEAKIFNYGRIYGAGLKFAEALLKQF
SPNVTDAEASTLAGQLYTSTKGKKIYSIGKYSGGTESILFNKLEEIATQDMPETPVLGAV
ITKALSSQNLKKSSFMTSRVNWTIQSSGVDYLHMLVVSMEYLAAKYDIDMRLCITVHDEL
RFLVKNEDAYRAAMALQVSNIWTRGMFCQQSGIDDIPQGCAFFSAVDIDHVLRKEVDFDC
ITPTHPDPIPHGESLDIEGLLARKDARLEDATHVIDHSIDKKAQKFPYTSRTPVLAALES
NPSKVISSLLDQIGGDKRAIRKLSKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG