YALI0F19382g

Overview

Description weakly similar to uniprot|Q9C2K7 Neurospora crassa Related to nuclear protein SA-1
Locus type CDS
Locus tag YALI0F19382g

Location

Species Yarrowia lipolytica Positions 2584622..2587701
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3080 (nuc.)
Previous locus YALI0F19371g Next locus YALI0F19404g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19382g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19382gYALI0F19382g_mRNA-001YALI0F19382g_CDS-001

Nucleotide sequence

 

>YALI0F19382g
ATGCCAAGCACAGAACCTAGACGGTCGCGACGAACGCGTGTTGAAAGAAGTGAGTGTGTG
AAAGAAGTGGATTGTGGTGTTTTGGACGTCCACTTGAACGCGTCAAATCTCAGACATGAT
ATGAGGATACGTGATTGTGGTTGTGCAATCAACCAGGAAAGAAGGGCACACACATCTGGA
GTTGTGTCCGTTTCGATTTCTGTTCGATTTACGCGTATCCTGCAGAAATCGCGTTCCTCA
CGTCCATACAAGTGATTCGCGTAGAACGCGTCTTCTGTGCCTCATGGTACTAACTCCAGC
ATACCACGACGACGCCTCTGATTCAGACGAGCCTGTAGTCCAGACACGACGAACCAAACG
ACACAAAACCAACAGCGGAAACGGCAACGCTAACACCAACCAGCTAATCGATCTTCCAGA
TGAGGCTGATGCGACTCCAAATTATCTGTACGATGCTCTATGCGATAGCGAGTCTTCTTT
GACGGAGCTGGCACGTGGTTGGATCGAAAGCTACGAGGAAAACTCGACTTTTGCCATCCG
GGACTTTGTCAACATGATTCTACGTCTAGCCGGATGCCATGACGTGATTGAGACCCACGA
CATTGAAGAGGGAGACTCAGCAGCAGCCACCGTGGCCCAGCTGCAGGACCACGTTCGAAA
CAAGTCGGCGGCGCAGTACCCCCTGGTTAACAAGAAACCGCCGCACAAATTTCTGCGGGA
CCATCTCAACGAGTTTCTGCGTCACCTGGTCACCTTTGCCAGCGACAAGGACCTGCTCTA
CGACGACGAGAGTGCCGAGGGCAACGTCATCGACAACCTGCTCATCTGGGTGTCTGCACT
GTCGTCTTCAAAGCTGCGGCCTTTCCGTCATACGGCCACTGTAGTGTCTCTCATGTTTCT
GACGAACCTGTGCAACGTGTACAGCTCTGTTCTGGAGCTCAAGGAGGACAATGAGAAGGT
GCTGACGAATGCGGCATCAGGCAAGGGCCGTGCTTCCAAAGGAAGAAGCGATGAACGAGT
CAGCGCAGCCAAGGACACTATCGAGACATGCTCCAACAAGATTGGCAAGCTGGCCAACTT
CATGAACGACATTTTTGAAACTTGCTTTGTAAACCGATACCGAGACGTGGACGCACGAAT
CCGAAGTGAGTGTGTTCTGCAGCTCAACAACTGGATCGAAAACTTGCCGTCTGTTTTCTT
TGAAGACCAGTATCTTCGATACTTTGGCTGGCTGCTGTTTGATACCGATCCCGGTGTACG
AGAGTCGGTGGTCAACGGTCTGGCCAATCTTTTTGATACCCTCAACACTTCAGGTTTCTT
GCATTTTACCGAACGATTCAGATCTCGTCTGGTAGAGATGGCTCAGAGCGACAGCGATCT
GGATGTGCGGGCTGGAGTGATTGAGTTCCTCGTGCTTCTGCAGCAGGCCGGGTTCCTTGA
ACAGGACAATGTAGACAAGGTGATAATGCTGCTGCTGGATGCCAATGACGTGGTCAGAGA
GCAGGTGGTTGATTTCATCGTGGACTACTGCAACGAGCAGAGTGAAGACGAAATCAAAAA
CATGGGCAGGAAGGTCAAGGCTGTCAAGAGTGTCGACGCCAAATGGGTCACCTACAAGAG
TGTCGTGTCTGTGGTAAGCAGTGCTATCGCCTTGCCTAGGGACAACGAATCGGAAGAGAA
CGAAGATGATGATGAGAGCTCAAATGCAAACATTGAAGTCGGAGCCACCATCGCCGAGGA
CCTTACGCAACATTACGAGTCCGAAGATGTTAAGAAACTGCTTTCATACCTGCTGTTTGA
TCCTTCTTCGTTATCCAAGGACAAGTTTGAGGAGCAGCTGAGCACCATTCTGCAGCTCTC
TGCCAGCCAACAGACGTTCTTGTTGCAACTAATCTCTGCTTGTGTGGAGGGTGTTTTCAA
GGAGGCGAAGGGCTCCAGAAAGGCTCAAGATTCGAACGATACAGAGACTATCTCCTCTCT
GATCATCGACGAGACTCCTGCTCTGTTGGACAAGTTTTCGTCTTCGTCTGACATGCTGAC
TTTGATCCTGCAGTTGCATTCCAAAGTCGACTTGTCTCTCTACACTGTCAAGCGACTCGA
AGACCAGTTCTCTGAGCTGCACTCTACCATTTGCCGTATTTTCAAGACCCATCACAACCG
ACAGACCCAGCTACAGTGTGTCAAGTTCCTTGCATCTGCCAAAAAGCAGGATATTTTCCC
CGAATCCACGCTTCCAAAGCTCGCTGACTTGATGGCTGAAATTTCCAGCGACTTTGCCAA
CGTACTGTCGGACCCTGCAGCTGACTGGAACACAATTGCCTCCGCTACTCAGAGAGTTGA
GGTCCTGTGTCAGTTTATGCCCTTCTCTGAAATATCTTCTGACGACTCTCTTCTGGACGA
AGTGATCGCGAAGGTCAAGTCTGCTGTTGAAGACGACGATGCAAACACCGAGATTGGCGA
CTTCATCAACTCTGCCATCAACCTGCTTCGTCTCCAGCTGCTCTGGTCCATTACAAACAG
CGATTCGTCTTCCGACTCGGCGTCAGATTTTATTTCCGAGGTCCTGGGTGCCATGAAGGA
GGTGTTCATGAAGGAGGATATGCCTATTAGTGCCACTATTAAGACGGCAGGCCTCTTTTT
GGAGATTCTCGTTGCACTGAAGATCAAGGACAAGCTTACCTCGGTAGGCGATATCATTGA
CAATGATGTACAGGCACGTATCATGTACCTGTTCATCAATGCCGAGTACACATATTTCGA
GGATCTTGGGGAAGACGCTCCTGCGATTGAGCGACTTCCCGCTCTGTTATCGTCGGACGA
CGAGGAACAACTTGAGGCTAACCTGGAGTCCAAGAACCCGTTGGAGGACTTGCAGTGGCT
GCTGTCGAAGATCTCCTTGGCTGTGACAGCTAAGATCTTGGACGAAAAGTGGAACTCACG
ACTGACACTTAACCAGAAGTTGTATGGGTAAATATGGGACTATTATCGATTAAGGGAGGT
TATTTAGACGGCTGTGTAACTAATATTATGATGTACAATACGACTACTGTTTGATTAATA
AATACATTTCTATAATTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19382g_CDS-001

Protein length: 907 aa.
Product: Conserved hypothetical protein

>YALI0F19382g_CDS-001 MPSTEPRRSRRTRVERTYHDDASDSDEPVVQTRRTKRHKTNSGNGNANTNQLIDLPDEAD
ATPNYLYDALCDSESSLTELARGWIESYEENSTFAIRDFVNMILRLAGCHDVIETHDIEE
GDSAAATVAQLQDHVRNKSAAQYPLVNKKPPHKFLRDHLNEFLRHLVTFASDKDLLYDDE
SAEGNVIDNLLIWVSALSSSKLRPFRHTATVVSLMFLTNLCNVYSSVLELKEDNEKVLTN
AASGKGRASKGRSDERVSAAKDTIETCSNKIGKLANFMNDIFETCFVNRYRDVDARIRSE
CVLQLNNWIENLPSVFFEDQYLRYFGWLLFDTDPGVRESVVNGLANLFDTLNTSGFLHFT
ERFRSRLVEMAQSDSDLDVRAGVIEFLVLLQQAGFLEQDNVDKVIMLLLDANDVVREQVV
DFIVDYCNEQSEDEIKNMGRKVKAVKSVDAKWVTYKSVVSVVSSAIALPRDNESEENEDD
DESSNANIEVGATIAEDLTQHYESEDVKKLLSYLLFDPSSLSKDKFEEQLSTILQLSASQ
QTFLLQLISACVEGVFKEAKGSRKAQDSNDTETISSLIIDETPALLDKFSSSSDMLTLIL
QLHSKVDLSLYTVKRLEDQFSELHSTICRIFKTHHNRQTQLQCVKFLASAKKQDIFPEST
LPKLADLMAEISSDFANVLSDPAADWNTIASATQRVEVLCQFMPFSEISSDDSLLDEVIA
KVKSAVEDDDANTEIGDFINSAINLLRLQLLWSITNSDSSSDSASDFISEVLGAMKEVFM
KEDMPISATIKTAGLFLEILVALKIKDKLTSVGDIIDNDVQARIMYLFINAEYTYFEDLG
EDAPAIERLPALLSSDDEEQLEANLESKNPLEDLQWLLSKISLAVTAKILDEKWNSRLTL
NQKLYG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG