YALI0F18348g

Overview

Description similar to uniprot|P53109 Saccharomyces cerevisiae YGL160w
Locus type CDS
Locus tag YALI0F18348g

Location

Species Yarrowia lipolytica Positions 2437203..2438936
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1734 (nuc.)
Previous locus YALI0F18326g Next locus YALI0F18359g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18348g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18348gYALI0F18348g_mRNA-001YALI0F18348g_CDS-001

Nucleotide sequence

 

>YALI0F18348g
ATGCTCGAAAAACGCCATGGCGACCACCACAACGCCAACATCAAGTACGGCACGTTTGTG
CTTGTCATTTCGCTGCTGGTCGTGTGCTACATCGCGGTTAGGAACCTAACCCAACCCGAG
GTTCGGGCACGCACGAAACGCGATCTCAGACTCCCGCTGTGGCTCTCGGTATTGCTGTGG
ACAGCCCTGGTCATTGGCATGGGAGTCATTCACGTCGAGGAACTCAACGAGGCGGCCAAA
CGGTTTGGGCGGCTCTGCTACGCTCTGCTACCGCTCATTGTCTTTCTCGCCATCAGACCC
TCCCCTCTGCCCCGGACCTTTTATCTGAAACTGCTACCGCTCCACAAGTGGCTGGGACGA
CTGGCCACGCTTGTCGGTGTCGTCCATGGTGTTCTCTACACCGTCCACTTCGTCAAGAAG
AACGAGTTCTACAAGGTGTTCAAGTTCGACAACTTTCTGGGCGTCATCATCCTGGCCGTC
TTCCTGGTCATGGTGGTCACCTCCCTGCCCTTCTTCCGAAAGCGAATGTATTCCCTCTTC
TACACCATCCACTACCTGTCGGCGTGGTTCGTGGCCATCGCTACAATCTTCCACGCTAGA
CCCGGAGTGGGATGGCTCTTCTTCTGGGTCGCTCTCTTCATGGGCAGCTCGCTGCTCTAC
CGTGTCCTCGCATCCAGCACGGTCCAGATCGAGTCTACGGAAGCCATGGGTCCCGATCTG
CATCGTGTCACTTTCCCCCGAAGTATTCTGCCCGAATTCTTTGTCCCAGCTTCTCATATT
CGAGTCTCTAGAACTCTCAGAAACCCACTCTCCTGGATCTCCTCCACACACCCATACACC
ATTTCGTCTCTGCCCTCAGACGATCACGTGGAGCTCATTGTTCGACCCACCAAGTTCTCC
CTGGCTCACGCTGCTTCTGGAACCCAGTTTGCCGTCTACGGCCCCTTCGAGTCTCTGCCC
GACGACTTTTTCTCGACGGCAAACCGAGTCCTAGTATTTGCTGGAGGAGCGGGTATCTCC
TTTGCTCTTCCTGTCGTCCAGACCCTTGCAAAGGCCGGAATCTCGCATAAGCTGGTTTGG
GTGTTGCGAAACAAGGCTGGTGTCAGTGAAGTCGAGTCGCGCTTGGGTGAAACGCCTACC
GATATCTACATCACTGGTCAAGATCCCTTCCTGGGAGAAGGTGTGGTGTACGCTAAGGAC
GCTGAAGGCACCGCTGGCCTCCTGTCCGAGGATATGGAGATGGAGGAGATTGGCCAGGAA
GATGAAGACAGAGAGCGAGATGAGCTCGACGACCTGCTCTCTGAAGACGAAGGCAGCAGC
AGCCAAGATAGCACCAAGGGCGCACACAAGAACAAGGGGAAGGACCAGGACAATGGAAAG
CGGGAAGCTTCTCAAAGCATTACATACCACGATGGCCGTCCCCAGCCCGCAGACACGGCC
AGCGCTTACTTTCTCGACCGAAGCGCTCCTGAGGGTAAGTGGATTCTTGCCTGTGGCCCC
AATGGTCTGGTCGTGACCGCTGAGCAGGCTGCCAAGAAGACTGGGGTTCGGTTTTGCAAC
GAGACTTACTCCATGTAAGGCGGATTGAATATCGGCATACAAAAATATTTATATCTGATA
GAATAAGAGCAGTTACGGTACAATAATTTGACTAAAGCAGATACACCTTGTCAACATAAT
CAAGAAAATGATATTAATAAATAATAGCAGCAACTAATAAATAACTCTGTATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18348g_CDS-001

Protein length: 526 aa.
Product: NADPH oxidase localized to the perinuclear ER, putative

>YALI0F18348g_CDS-001 MLEKRHGDHHNANIKYGTFVLVISLLVVCYIAVRNLTQPEVRARTKRDLRLPLWLSVLLW
TALVIGMGVIHVEELNEAAKRFGRLCYALLPLIVFLAIRPSPLPRTFYLKLLPLHKWLGR
LATLVGVVHGVLYTVHFVKKNEFYKVFKFDNFLGVIILAVFLVMVVTSLPFFRKRMYSLF
YTIHYLSAWFVAIATIFHARPGVGWLFFWVALFMGSSLLYRVLASSTVQIESTEAMGPDL
HRVTFPRSILPEFFVPASHIRVSRTLRNPLSWISSTHPYTISSLPSDDHVELIVRPTKFS
LAHAASGTQFAVYGPFESLPDDFFSTANRVLVFAGGAGISFALPVVQTLAKAGISHKLVW
VLRNKAGVSEVESRLGETPTDIYITGQDPFLGEGVVYAKDAEGTAGLLSEDMEMEEIGQE
DEDRERDELDDLLSEDEGSSSQDSTKGAHKNKGKDQDNGKREASQSITYHDGRPQPADTA
SAYFLDRSAPEGKWILACGPNGLVVTAEQAAKKTGVRFCNETYSM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG