YALI0F18326g

Overview

Description similar to uniprot|Q6C1S5 Yarrowia lipolytica YALI0F13761g
Locus type CDS
Locus tag YALI0F18326g

Location

Species Yarrowia lipolytica Positions 2435835..2437260
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1426 (nuc.)
Previous locus YALI0F18304g Next locus YALI0F18348g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18326g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18326gYALI0F18326g_mRNA-001YALI0F18326g_CDS-001

Nucleotide sequence

 

>YALI0F18326g
ATGCCTTCATCCAGCTCGGAGCAGCATCCCTCAGCTCCCAATGGATCGTTGGACAAGGAT
CTGTTTTCGGAACACTCCCGACAACTTGAAATCGACAAGGAGAGTCTTTCAAGCCAACTT
CCTTCATACCGACGGAGAAAGCGGCTGGACATTGTTAGCGACGAGGAAAAGGAGGATGTG
GGGCCTCCAGTTCACAGACACAAGCTCAGACCGACGTCAATGGCCAAGGTTTTGGGACTC
AACATGACCGAGCTGGAACTGCTGCGGTTCTACTTCCATGAGAGTAGCCCGATTCTGTGC
GCTGCCAGTGGAGCCAAAGACTCGATATGGATGGGGAACGTGCCTGCGCTGTCCAACAGA
AGCCCTGCTCTCAAACGGGCCGCCATGACCTTTGCTACGTTGCATCTGGGAAAGAACCGT
CAGACTGCAACTTATCTTTTGAACGACGGAAACGAGCATCCCACATCTAGTGGTCCTCCC
GATATGAAACAGGTGATCGGCTACGTGCCACTGCAAGACCGTGTCACCGAGAGACTGCTC
ATTGAGTTCACAGAAACGCTGCGAGCTCATAAGAAGGAGATCATGGAGACGGAAGCAGAA
AACTGTGAAGCTCTACTGGTGACATCTGTCGTCATCTACCTGGTGGCCATGTCTCTTGGC
CCTTTAATTCCTCTTGCCAACTTTGACGGAGGCTCAGATCTCTTTTCAATCGTGCGCAAT
CTGCGTCTCATCACAACCACAATCACAGGCCAAGAACCCGTGATCCATCCTCCTTTCGAG
GCACCTGCTGAGGGCAGCATCCGGCTGCCCAGGGAAGAGGCTCTGTGGGAGATTGTCGAG
TTGGTGGAACTCAATATGGATTACTCGCCCATCACGAAGCGACGTATCAAGGGCATTCTG
ACCAAGGAAATCAACTCTCTGATCCAGCTGTTGAACATGGACATCCTCAACCACAGTGTC
GCGCATTTCTCGGCCTGGTGCACCTACTGGCAGCCTGAGTTTTCAGACCTCAAGAACAAC
GCCAACCCCTACGCTCTCATGATCATCTGCTACTATGCCGCCTACACCCACATGTGGCAT
ATTCTCTTCTGGTGGGCAGACAGATCATCAGAGGACGTCTACTACATCATGGATCACATT
CCTATAGAGTTCCATGACTATCTTCAATGGCCTCTGGAAATCGTGCAGACCTACGAGTAC
AACTATGAAGACATGTTGTCAGGGAAGTTACGGGAAATGACTCTCGCATAGCAAGGAGAC
CTCATCCCCACAATCTAACAACTACGGTACTGTACTTGTACTGGTACAGTACTTGTAGTA
CATGAAAAAAGTGATCCACCAACTATTCTAACAGCCACTACTTACATTAGATACAGAGTT
ATTTATTAGTTGCTGCTATTATTTATTAATATCATTTTCTTGATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18326g_CDS-001

Protein length: 417 aa.
Product: Hypothetical protein of a 8-member gene family, conserved in the Yarrowia clade

>YALI0F18326g_CDS-001 MPSSSSEQHPSAPNGSLDKDLFSEHSRQLEIDKESLSSQLPSYRRRKRLDIVSDEEKEDV
GPPVHRHKLRPTSMAKVLGLNMTELELLRFYFHESSPILCAASGAKDSIWMGNVPALSNR
SPALKRAAMTFATLHLGKNRQTATYLLNDGNEHPTSSGPPDMKQVIGYVPLQDRVTERLL
IEFTETLRAHKKEIMETEAENCEALLVTSVVIYLVAMSLGPLIPLANFDGGSDLFSIVRN
LRLITTTITGQEPVIHPPFEAPAEGSIRLPREEALWEIVELVELNMDYSPITKRRIKGIL
TKEINSLIQLLNMDILNHSVAHFSAWCTYWQPEFSDLKNNANPYALMIICYYAAYTHMWH
ILFWWADRSSEDVYYIMDHIPIEFHDYLQWPLEIVQTYEYNYEDMLSGKLREMTLA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG