YALI0F18194g

Overview

Description similar to uniprot|P53538 Saccharomyces cerevisiae YNL222w SSU72 suppressor of cs mutant of SUA7
Locus type CDS
Locus tag YALI0F18194g

Location

Species Yarrowia lipolytica Positions 2420647..2421294
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 648 (nuc.)
Previous locus YALI0F18172g Next locus YALI0F18216g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18194g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18194gYALI0F18194g_mRNA-001YALI0F18194g_CDS-001

Nucleotide sequence

 

>YALI0F18194g
ATGACGGAGCTAAAGATGTGCACCGTGTGTGCCTCAAATCAGAATCGATCAATGGAGGCC
CACAAGGTTCTCAAGGAGGCCGGGTTCGACGTGGAGAGTTACGGAACGGGAAGCGCGGTC
AGACTGCCAGGTCCAGCGTACGACAAGCCCAACATCTACGCCTTCGGAACGCCATACGAT
GATATTTATAACGAGCTCAGTGCACAAGACGAGCGATTGTACACAGCTAACGGACTGCTG
ACCATGTTGGATCGAAATCGAAAGATCAAGACGGCTCCTGAGCGATGGGTGGAACACAAG
AACGTCTTTGACGTGGTCTTCACCTGCGAGGAGCGGTGCTTCGAAGCTGTTTGCGACGAC
CTGATGGACCGGGGGGAAAAGTTGCAGCGACCTGTGCATGTTATCAACGTGGATATCCGT
GATAACCATGAGGACTCTGTGATTGGAGCCCAAGGCATCTTGAAGCTGGCCCGGAGTCTA
GCTGACAGCAAAGACCTCGACGCACAAATCATGGGTATCATGGACTCGTGGCAGGAGCAG
CATCCCAAGCTGCCTCTGATGCATGCTGTTGGCTACTTTTAGACAGGACCAGAAGGACGT
GTATCTCACTATTGTATAAATTATATATTTAAAAATGCTTCATTATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18194g_CDS-001

Protein length: 194 aa.
Product: Phosphatase and transcription/RNA-processing factor, putative

>YALI0F18194g_CDS-001 MTELKMCTVCASNQNRSMEAHKVLKEAGFDVESYGTGSAVRLPGPAYDKPNIYAFGTPYD
DIYNELSAQDERLYTANGLLTMLDRNRKIKTAPERWVEHKNVFDVVFTCEERCFEAVCDD
LMDRGEKLQRPVHVINVDIRDNHEDSVIGAQGILKLARSLADSKDLDAQIMGIMDSWQEQ
HPKLPLMHAVGYF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG