YALI0F18172g

Overview

Description weakly similar to uniprot|Q07395 Saccharomyces cerevisiae YDL063C Putative protein of unknown function
Locus type CDS
Locus tag YALI0F18172g

Location

Species Yarrowia lipolytica Positions 2418497..2420470
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1974 (nuc.)
Previous locus YALI0F18150g Next locus YALI0F18194g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18172g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18172gYALI0F18172g_mRNA-001YALI0F18172g_CDS-001

Nucleotide sequence

 

>YALI0F18172g
ATGGCAAAAATCAAGCGAAAAGCCAAGCACACCAAGCGAGACAACCCCATCGCCCGAAAG
GCGTCCCAGGCCGCCAAGGACGACCGCAAGGATGAAAACACACGAACCACCAAGATTCTG
CCTCTGCTAGAAAAGCTCAACGGCGGCAAGCCCGCAGACAAGTGCACTGCCATTGGAATG
ATCACAGCTATGGTCGAGGATCCTAAGCTGCGACAGATGCTTCTCAAGGAGTCGCTCATC
CAGACTGTGATCGACAAGCTGCTTCCTGACGCTTCCGAGGAGGTTGTCATGGAGTCGTAC
GGCCTGCTGCGAAACATTGTCCTGGAGGAGGGCTACGACGTGGCCGTGTTCATGTTCCGA
AAGAACGTCATCAAGATTGCATGCGACTCTCTGGAGAAGATTGTTTCCACCTGCCAGAAC
ATTGCCAACGGCTCCCAGCAGATCCCCAAAGGAGATCAATTCACTCTACTGTGCGAGTTT
GCCGAAAACATTCTGTCTCTGCTCACCAACATGGGCGTGACTTCCGATGACATTTTCGAC
GCCATCGCCTCTTCGCCAGCTGGCGTCCAGACCGTGGCTGCTCTTCTGGAGCTGCGAAAG
ACCAAGGCTGAGTTGAATCCCAAGTTCCCCTCTGCTGTGCTCTCTGCTGCCTTTGAGTAT
CTCTACACCTTTTCCGAGTCTAACCCCGAATTTTACAAAACCATTCCTTTCGACTATAAG
ATCTACCTCGAGGATACCACTCTACCCATCGCTGCCCAGGTGTTTGTGTGGGGTCTGCAC
TACAACATCTGTGTCGAGAGCCAGGGAGTAGGCTCTAAGGGCCGAGACGCCTCTCTGTCC
GAGATTCTGTCGCGACTGCTCATCATTTTCAACTCTAACTCTGCATTTGCCGACCTGCAG
GCCAAGCAGGATGCTGGCTCCAAGGACGGAACTGTGGTTGCCACGGACAAGAAGGACATG
GACGCCATTGAGGCCCGCTCCACCGTGAACGCCCTCCAGGTCATTCTCGAGCTCATTACA
GACATTGCCGAACAGGTCACCTGGTCAGGCGTGACCGAGGAGCCCGAGGACGTCGACGAA
GATATGGAGGTTGACATCCCCCAGGACATTGACTTTGGTCATGGAGACAAGAACGGCGCT
GAGGGAACTGCCGCTACTTCTACCATCAACTTGCTTCTCAACGAGGCCTCTGCTGTCATT
GAGAAGGCTCTCACTTATGCCCCTCTCGAGTCGCGAGCCATGGCTGCTCTCAACAATCTG
GCATGGACTATGGCATCTCACGAGCCCACAAAGGACTCTGAGCAGTGGCAGGGAGCCGCC
CAGCAGCTCTGGACCAATGTGTTCCCCATGCTCGAGAAGTACGAGGGCGAGCTTGCTATT
GACTCCCTCACATCTGCTGTTGGTGTTCTTTGGGCTGTAGCAGCTGCTCTGGACTCCAAG
ATCAACTCTCTGACTGTTTCCCAGTCCGACTTCATTCTGGCACAGATTGAGCGAGTCACC
AAGGCCACGGAGACTCTCACTGCCGACGAGATTGCCGACTATCACCAGCGAGCTGTTGCT
CTGGTTGGTCTTCTAGCAATGGCTACCGGCAAGAGTGGCTCTCAAGAATCCATTGCCCTG
GTTGAGAAGGTTGGAGAGTACCTTCTCCAGCTTCTGGAGGCTCTTCCGCAGACCCAAACC
CAGGTTGCTCTACAGGCCGTGGACAAGATCTTTGACATCTTTGGCGACAAGTACCCCTAC
GATGGGCCCGTATTTGTCAACAAGGGCTACCTGAAGCGACTGGAGCCTCTGCTGCCCAAG
GTTCGACACATGGCCAAGAAAATTAACAAGAAGCAGAACCCCAGTTTGCGGGAGGACGCT
GATGCTGCCTCTCAGAACCTGATGCGTTTCATCAAGTACAAGGCTGACGGCAACTAGACA
GGTTATCTAGTGTATTGAATAAATAGATTAATGACGATGTTGTAATGATAGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18172g_CDS-001

Protein length: 639 aa.
Product: Conserved hypothetical protein

>YALI0F18172g_CDS-001 MAKIKRKAKHTKRDNPIARKASQAAKDDRKDENTRTTKILPLLEKLNGGKPADKCTAIGM
ITAMVEDPKLRQMLLKESLIQTVIDKLLPDASEEVVMESYGLLRNIVLEEGYDVAVFMFR
KNVIKIACDSLEKIVSTCQNIANGSQQIPKGDQFTLLCEFAENILSLLTNMGVTSDDIFD
AIASSPAGVQTVAALLELRKTKAELNPKFPSAVLSAAFEYLYTFSESNPEFYKTIPFDYK
IYLEDTTLPIAAQVFVWGLHYNICVESQGVGSKGRDASLSEILSRLLIIFNSNSAFADLQ
AKQDAGSKDGTVVATDKKDMDAIEARSTVNALQVILELITDIAEQVTWSGVTEEPEDVDE
DMEVDIPQDIDFGHGDKNGAEGTAATSTINLLLNEASAVIEKALTYAPLESRAMAALNNL
AWTMASHEPTKDSEQWQGAAQQLWTNVFPMLEKYEGELAIDSLTSAVGVLWAVAAALDSK
INSLTVSQSDFILAQIERVTKATETLTADEIADYHQRAVALVGLLAMATGKSGSQESIAL
VEKVGEYLLQLLEALPQTQTQVALQAVDKIFDIFGDKYPYDGPVFVNKGYLKRLEPLLPK
VRHMAKKINKKQNPSLREDADAASQNLMRFIKYKADGN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG