YALI0F18128g

Overview

Description weakly similar to uniprot|M2S2W0 Bipolaris sorokiniana hypothetical protein COCSADRAFT_39242
Locus type CDS
Locus tag YALI0F18128g

Location

Species Yarrowia lipolytica Positions 2414156..2415464
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1309 (nuc.)
Previous locus YALI0F18106g Next locus YALI0F18139g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18128g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18128gYALI0F18128g_mRNA-001YALI0F18128g_CDS-001

Nucleotide sequence

 

>YALI0F18128g
ATGCCATTTTTCAAGAATCTCGTCCGATTTACTCGCGACGTCACCCGGGACTTTTCCCGC
ACCGTCCACGAGACGTACGAGAGCCTGGCTTTCAACATCTCACTGAGATGTGAGGCCCGA
CTCCAGGCACATCGTGAGGTGCTGTCCTATGCCCGGGCTGGCCGTCCATTGACGTTCCGT
CAGAAGTTTGACATGTTCAGCAAACATCGCCAACATGCCCGTCGAATGCACACCCGACAC
TTCAGCTCAAACAATTGTGCGCGTCACATTAGCCGTGTATTCGAGAACGGCTACAACTAC
CAGCGAGCACCGGGCTGCCGAAGGCGAATCACCTACCCCCTGGCAGGCTACGCGATTCGA
AGAGCCTTTAGTTCGGCGTTCGAACGCAAAGATACTACATGCAACTTCGGCCGAAGATTG
TACGCTACAATGGCCATGCCCTGTAAGGGCATCCATAAGCTACAAAAGACGGCCTTTGGA
GGAAAGAGCATCGTGGAGGTCACCTCCCAGCTGAGAGTGCGGGAGCTAGATCTGTGCTCC
GCTGCCCAGGAGTACTTCCCCCGATATTTTCTTCCCGTCGAGGTTGAGTCTGTCACCGAG
GAAGAGTCCCTCTTCCAGTCTTCTTCCTGGGTCGCCTGTCTGGAGCCTACTTCCACAGGC
ACATTTGTGGACTTCAACTTTGCTCCCCAGCTCTCTCTGGAGGCGGAACAGCTGACCACA
GAATCCCTGGACCAACTGGAGCGAGACTTGCAGGCCTTTGTCCAGGAGACCAAGGTGCTT
CTTAAAGACATCAAGACAGTGTGCGCCTCTCTTGGAGAGCTGCCCGTAACTGTCAACAAA
AACAACGTTCGTGTTCACTTTCCTAATGCTGATGCTGAAAAGGTCAACATTATGCTCAAG
GACATTGGCGTGACCCGAGGAGTCATCACCGAGGAGGAGTCCAGTGACTCTTCTTCCGAG
TCGCTCATGTCTGCCAGCGTCGTGGAAACCAACTGGAACGAGTTTCTGGAGGGCTCTCGT
CTGCAGCCTGCTGTGCAGGCTCGAACTGAGGCCATTTCTGTTTCGGACCTGTGTTCGACA
CCTCCCTCGCTGTCCGAGTCCCCGTCCAGTGCTTCTTCTTACTCTCTGAGCAATGAAAGC
TCCCAGGAGAACACTCACATGGACTCTTCTGTTGAGATTGTCAGTATTTATTAACTAATG
AAAGGATTACGAATGATTTAATCGATACTGTAGTGCAGTAGTCTCAGCCATATACTGTCA
TCACCGGTACAGTACATACAGTACATACAGTTCTTCTATCGCTGTCGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18128g_CDS-001

Protein length: 398 aa.
Product: Conserved hypothetical protein

>YALI0F18128g_CDS-001 MPFFKNLVRFTRDVTRDFSRTVHETYESLAFNISLRCEARLQAHREVLSYARAGRPLTFR
QKFDMFSKHRQHARRMHTRHFSSNNCARHISRVFENGYNYQRAPGCRRRITYPLAGYAIR
RAFSSAFERKDTTCNFGRRLYATMAMPCKGIHKLQKTAFGGKSIVEVTSQLRVRELDLCS
AAQEYFPRYFLPVEVESVTEEESLFQSSSWVACLEPTSTGTFVDFNFAPQLSLEAEQLTT
ESLDQLERDLQAFVQETKVLLKDIKTVCASLGELPVTVNKNNVRVHFPNADAEKVNIMLK
DIGVTRGVITEEESSDSSSESLMSASVVETNWNEFLEGSRLQPAVQARTEAISVSDLCST
PPSLSESPSSASSYSLSNESSQENTHMDSSVEIVSIY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG