YALI0F18106g

Overview

Description similar to uniprot|Q12344 Saccharomyces cerevisiae YPL249C (ohnolog of YMR192W)
Locus type CDS
Locus tag YALI0F18106g

Location

Species Yarrowia lipolytica Positions 2411326..2413562
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2237 (nuc.)
Previous locus YALI0F18084g Next locus YALI0F18128g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F18106g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F18106gYALI0F18106g_mRNA-001YALI0F18106g_CDS-001

Nucleotide sequence

 

>YALI0F18106g
ATGAGTGAAGTGAGTAAGGAACACAAACAGGCGCAGCCAACGCAATTGCGCACGCCCCCG
AAGGTCCGCCTCTCGCCACCGAGCCTCTGACTTCACACACTAACCCAGAAACCTGAACTT
GTATCCGAAACGGAATCTGAAGACGACCACAGATACGAGGACACTGAAGATGTTCTTTTG
GGCTCAGAGGATGCCCCTACTAGTGCAGCAGCCGAAGAAGTTGCTGGAAACACATCGACC
ATCTCCATTGGCACTGCCAAAGCCGACGACGATGAACTTCCCGCCACTCCCAAGCCAACT
TCGCCCACGTCACTGAAAGTGACACCTGGATCTTTCCCTGGAGCTGCGGGGGCAGATGAG
GACTCCACCACCACGCCCTCGGCCACGTCGCCCTCTGCTAACGTTCTCAACTCCGACGGA
GAATCGCTAACACCTGGCACTTTCCCCGATGCCACATATGACCAGACCCCCTCACCCGTA
TCATCGGCTCCTCCTCCTCCGCTACCCCATCGGCCCGCCACCCACGGCGACGGTGGAGCA
GCCTCTGCTCGAGGAGAAACTCCCCCCACACTTCCTCCTCGGCAGGGAGCTCCCAGTCTG
CCACCACGAAAGCGGTCAGCCTTCTCGTGGTTCCTGGGCAACAAGAGCCAGACCAGTCTC
AAGAGCGAGGACAACATCACGGCACTGGCCAACAGCCACCGTGCCAACGCCCAGCCCGCC
AAGGTCGATGAGAAGATTGTGGCCGAGGGCTACGGTCTCATGTACAGCCGAATGCAACAG
AACCAGGACAGCCTGAGTGAAAAGGAGGAACGGGAGCGACAGGCGGTGTTGCAGGCTGGC
GAGCTACTGCAGGAGGACTTCCGACAGTTGCGACAGAAGGAGTCGCTGGAAAACCCCTTC
ATTGACTGGGACTTTTGGAGTCGGGTCATTGAGGACTACGCAACCGTGGCCAAGGAGCAC
CCTAAACAGCTCAAGGAGGCTATTAGCGCCGGATTCCCCACAGAATTACGGTCTATAATC
TGGCAGATTATCACAAGCTCTAAGAACGCTGCTCTGCAAGACTTCTACACTGAAATCCTC
AAGGAGAGCACTCCCCACGAGAAGGCCATCCGACGAGATCTGTCTCGAACGTCGTTTGTC
ATGGAGACCTCTCCCGACTCTCTATACAACGTCATCAAGGCATACAGTCTGTTTGACCCC
GAGGTGGGATACACACAGGGCATGGCGTTTGTCACGACCCCTCTGCTACTGACCCTCAAC
GAGGTGGACGCTTTCTGCCTGCTAGTGCGGCTGCTCAAGGACTACGAGCTCAGAACAATG
TTCCTGCAGGAAATGCCCGGACTGCATCTGAAGCTGTACCAGTTTGACAGGCTGTTGGAA
GACCAGGTCCCGTCTGTGCATATCCATTTGACCCGCCAGGGAGTCAAGTCGTCCATGTAC
GCCTCTCAGTGGTTCCTTACGCTGTTTGCATACAAGTTCCCTCTATCAATGGTGCTACGA
ATCTTTGACATCATCATGACCGAGGGTATCGAGGCCATTCTCAAATTTGGAGTGGCTTTG
ATCCGGAAGAACGCCGACACAATTTTGGCTCTCAAATTCGACCATCTGCTGCCCTTCCTC
AAGGAGTCTATTTTCGACGTCTATAGAGAGGGGGCTGGAGATGTGTTCCGAGTCAACGAG
TTTGTGCGGGATGCCATGGACGTGAAAATACACCCTCTGTTGCTACACAAGTACCAGGAG
GAGTATCTCGAGATCAACCGTCTTGAGCGGGAGCGATTGGAGGAGGTTGAGGCTCTGCGA
CTTGCCAACGGTCAACTGACTCTGCAGGTGCGACGAATCGAGTCGACTCTGGTGGCTCTC
GAGAAGGAGCATATTGAGGTTGCTAACGAAATGGTACAGGGCAAGGTCAAGCTTGCATCT
CTGCAAGACGAGAATGAGACTCTGAACATGCAGGTGAGCGAGATGAGACGAATCACTGGT
GACGAGGATCTTGAGGCTCTGATGGATCTCAGACAGGACAACGAGCGTCTGGTTGCTGAG
AATGAGCAGCTGCAGTCGCAAATGACGGAGATGAAGCAGGAGCTCGACGAGATTCGGGGA
AAGCATGGCGAGCTTGATGCCCAGCACACCAATCTCAAATCCAAATGGGGCGACATGCGC
AAGCTTTTGGATGCCATGCCCCAGGAATAGCTAGCTACGTAACATAACCAAGCAATATTA
TATTTAAAAGGCAAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F18106g_CDS-001

Protein length: 697 aa.
Product: GTPase-activating protein (GAP) for yeast Rab family members, putative

>YALI0F18106g_CDS-001 MSEKPELVSETESEDDHRYEDTEDVLLGSEDAPTSAAAEEVAGNTSTISIGTAKADDDEL
PATPKPTSPTSLKVTPGSFPGAAGADEDSTTTPSATSPSANVLNSDGESLTPGTFPDATY
DQTPSPVSSAPPPPLPHRPATHGDGGAASARGETPPTLPPRQGAPSLPPRKRSAFSWFLG
NKSQTSLKSEDNITALANSHRANAQPAKVDEKIVAEGYGLMYSRMQQNQDSLSEKEERER
QAVLQAGELLQEDFRQLRQKESLENPFIDWDFWSRVIEDYATVAKEHPKQLKEAISAGFP
TELRSIIWQIITSSKNAALQDFYTEILKESTPHEKAIRRDLSRTSFVMETSPDSLYNVIK
AYSLFDPEVGYTQGMAFVTTPLLLTLNEVDAFCLLVRLLKDYELRTMFLQEMPGLHLKLY
QFDRLLEDQVPSVHIHLTRQGVKSSMYASQWFLTLFAYKFPLSMVLRIFDIIMTEGIEAI
LKFGVALIRKNADTILALKFDHLLPFLKESIFDVYREGAGDVFRVNEFVRDAMDVKIHPL
LLHKYQEEYLEINRLERERLEEVEALRLANGQLTLQVRRIESTLVALEKEHIEVANEMVQ
GKVKLASLQDENETLNMQVSEMRRITGDEDLEALMDLRQDNERLVAENEQLQSQMTEMKQ
ELDEIRGKHGELDAQHTNLKSKWGDMRKLLDAMPQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG