YALI0F17842g

Overview

Description highly similar to uniprot|P43616 Saccharomyces cerevisiae YFR044c Glutamate carboxypeptidase-like protein
Locus type CDS
Locus tag YALI0F17842g

Location

Species Yarrowia lipolytica Positions 2374597..2376500
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1904 (nuc.)
Previous locus YALI0F17820g Next locus YALI0F17864g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17842g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17842gYALI0F17842g_mRNA-001YALI0F17842g_CDS-001

Nucleotide sequence

 

>YALI0F17842g
ATGGCTGATCTCAACAAGTTTTTCGAGACCGTCGACTCTCTCAAGCCCGAATTCATCCAG
CGTGAGTATCTGCCTGCGGATTTGGCGGCTAAAACACCCTCATGTGTGGAGTGGGGTTAT
GGGTCTGTGGGACTAACCACAGTTGCACAGACACAGGCACTGGCGAAAGACACGACACAG
ACCAGCACAGAGAGTGTGTCATTACGCGCCATGGCCGTGGAAATGTCGTGGTCTCAACGT
TTGTGCCAGTAGTTGTGTCTCTCCATCTCCACTCGTGACGTGTCAGTGGCGTTTTTTAGT
TACCGCCCAAGTACACCGATAACCGAATCAACCATACTAACCACTAGGACTCTCTGACGC
CGTGGCTATCCCCTCCGTGTCTGCTGACGCCGAGCACCGACCTGAGGTGGTCAAAATGGC
CCATTGGACCGTTGACCAGCTCAAGGCTCTGGGCGCTCACGACATTGAGCTCCGAGAGCT
GGGTGTCCAGGAGGGCACCGAGGATCTGCAGCTTCCCCCCGTTGTGCTTGCCAAGTACGG
CAATGATGCCAACAAGAAGAACATCCTTATCTACGGCCATCTAGATGTTCAGCCCGCTCT
CAAGGAGGACGGCTGGAACACCGACCCCTTCGTTCTGACCGTGGACGAGGAGAAGGACGT
CATGTACGGCCGAGGCTCCACCGATGATAAGGGTCCCGTCATTGGCTGGCTCAACGCCAT
TGAGGCCTACAAGAAGGCCGGCATCGACTTCCCCGTCAACCTTGTCATGTGTTTCGAGGG
CATGGAGGAGTCTGGCTCTCTCGGTCTTGAGCAGCTCGTCTTCGCCGAGGGCGACAAGTA
CTTCAAGGGTGTTGACGCCGTGTGCATCTCCGACAACTACTGGCTGGGAACCACCCACCC
CGTTCTTACCTACGGTCTGCGAGGCTGCAACTACTATTCCATCACCATCACCGGCCCCGG
TGCTGATCTGCACTCCGGTGTCTTTGGAGGTATTGTCAACGAGCCCATGATTGATCTCTC
CAAGGTGCTGGCCACCCTGGTCGACGGCAAGGGCAAGATCCAGATCGAGGGCGTCGACAA
GATGGTTGCTCCCGTAACCGAGGAGGAGCGATCTCGATACGACGACATTCACTACGACAT
CAAGGAGCTCACCGAGGCTACCGGTGGTAACGACATCAACATGCACTCTACCAAGGAGGA
CACCCTCATGGCTCGATGGCGATACCCCTCCCTCTCTATCCACGGTATTGAGGGCGCGTT
CTCTGGTGCTGGAGCCAAGACCGTTATTCCTGCCAAGGTCTCCGGTAAGTTCTCCATCCG
AACTGTCCCCAACATCAACTCCAAGATGCTGGACGAGCTTGTGTTTGCCCACGTTGAGAA
GGAGTTTGCCAAGCTCGGTTCTAAGTGCAAGCTGAACGTCGAGCTTGTCCACGACGGTGA
CTACTGGGTGTCTGACCCCAACAACTGGAACTTCACCGCCGCCAAGAAGGCCACCAAGGC
CGTGTGGGGAGTCGAGCCCGATCTCACCCGAGAGGGTGGATCTATTCCTATCACCCTCAT
TTTCGAGCAGGCCACCAAATCTGATGTTCTGCTGCTGCCCATGGGCCGAGGAGACGATGG
AGCCCACTCCATCAACGAGAAGCTCAACATCTCCAACTACATTGGAGGAGTCAAGACTCT
CGGAGCCTACCTCCACTACATTGCTGAGGAGAAGAAGGAGTAAGCGGGGTGGAAATACCG
CTATTTATATAAGTAAAGGTTGAAGATCTTCAGTGAGAGTTGTGAGAGCATCTTTATCGG
TGTGTTCTACGGTAGCTGTAGATAGGTTGAAGATTATTGCCGATGAATGGGCAATATTTA
GTTACTTGTGACGATGAATTGTTAATTGTTCTGTATATTAGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17842g_CDS-001

Protein length: 479 aa.
Product: Cys-Gly metallo-di-peptidase, putative

>YALI0F17842g_CDS-001 MADLNKFFETVDSLKPEFIQRLSDAVAIPSVSADAEHRPEVVKMAHWTVDQLKALGAHDI
ELRELGVQEGTEDLQLPPVVLAKYGNDANKKNILIYGHLDVQPALKEDGWNTDPFVLTVD
EEKDVMYGRGSTDDKGPVIGWLNAIEAYKKAGIDFPVNLVMCFEGMEESGSLGLEQLVFA
EGDKYFKGVDAVCISDNYWLGTTHPVLTYGLRGCNYYSITITGPGADLHSGVFGGIVNEP
MIDLSKVLATLVDGKGKIQIEGVDKMVAPVTEEERSRYDDIHYDIKELTEATGGNDINMH
STKEDTLMARWRYPSLSIHGIEGAFSGAGAKTVIPAKVSGKFSIRTVPNINSKMLDELVF
AHVEKEFAKLGSKCKLNVELVHDGDYWVSDPNNWNFTAAKKATKAVWGVEPDLTREGGSI
PITLIFEQATKSDVLLLPMGRGDDGAHSINEKLNISNYIGGVKTLGAYLHYIAEEKKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG