YALI0F17820g

Overview

Description highly similar to uniprot|P39708 Saccharomyces cerevisiae YAL062W (ohnolog of YOR375C) GDH3 NADP- glutamate dehydrogenase
Locus type CDS
Locus tag YALI0F17820g

Location

Species Yarrowia lipolytica Positions 2372007..2373435
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1429 (nuc.)
Previous locus YALI0F17798g Next locus YALI0F17842g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F17820g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F17820gYALI0F17820g_mRNA-001YALI0F17820g_CDS-001

Nucleotide sequence

 

>YALI0F17820g
ATGAACTACCCCGCTGAACCCGAATTCCAACAGGCTTACGACGAGCTCTACAACTCCATC
CACGACTCGACTCTGTTCGACAAGCACCCCGAGTTCGAGAAGGTCATCCCTGTGGTGTCT
GTTCCTGAGCGAATCATCCAGTTCCGAGTTGTGTGGGAGGACGACCAGGGCAAGCTGCAG
GTCAACCGTGGCTACCGAGTCCAGTTCAACTCCGCTCTGGGCCCTTACAAGGGAGGTCTC
CGATTCCACCCTTCCGTCAACCTGTCCATTCTCAAGTTCCTCGGATACGAGCAGATCTTC
AAGAACGCCCTGACCGGCCTCAACATTGGAGGTGGTAAGGGAGGTGCTGACTTTGACCCC
AAGGGCAAGTCCGACGCCGAGATTCGACGATTCTGCTACGCCTTCATGGGCGAGCTCCAC
AGACACATTGGTGCTGACACTGATGTCCCTGCCGGTGATATCGGTGTTGGTGGTCGAGAG
GTCGGTTTCCTCTTCGGCGCCTACAAGAAGTACAAGAACACCTGGGAGGGTGTTCTGACC
GGTAAGGGTCTAACCTGGGGTGGATCTCTGATCCGACCTGAGGCTACCGGTTTCGGTCTC
GTCTACTACGTTGAGAAGATGATTGAGTACGCCACCTCCGGCAAGGAGTCCTTCAAGGGC
AAGCGAGTCGCCATCTCTGGTTCCGGTAACGTTGCCCAGTACGCCGCTCTCAAGGTCATT
GAGCTCGGCGGAAACGTTGTCTCCATGTCCGACTCTAAGGGCGCTCTGGTGCTGGTCTCC
GACTTCACCGAGGGCTTCACCCCCGCCGAGATTGAGCAGATTGCCGACATCAAGCTCCAG
CACAAGGAGCTGGCCTCTCTCTACCCCTCCGCCACTCTTCCCGAGACCAAGTTCAAGTAC
ATTGAGGACGCTCGACCCTGGTGCCACGTTGGCAAGGTCGACGTTGCTCTTCCTTGTGCC
ACCCAGAACGAGGTTTCCGGTGAGGAGGCCAAGTCTCTGGTTGCTGCTGGCTGCAAGTTC
ATCGCCGAGGGCTCCAACATGGGCTGTGAGTCCGACGCCATTGAGGTCTTCGAGGCCGAG
CGAATGGCCCGACCTAACGGTATCTGGTACGGTCCCGGTAAGGCTGCCAACGCTGGTGGT
GTTGCCGTTTCCGGTCTGGAGATGGCCCAGAACTCTCAGCGAATCTCCTGGACCAAGGAG
GAGGTTGACCAGAAGCTCAAGGATATCATGGTCGACTGCTTCAACACCTGCGTTGAGACT
GCTTCTACTTACTCCTCCGAGAAGGTCGATGGCCTCCCCTCTCTCGTCAAGGGTGCCAAC
ATTGCTGGTTTCCTCAAGGTCTCTGCTGCCATGAAGGACCACGGTGATTTCTGGTAAACT
AACAATTAACGACTGTATGATAGAATAATAATATTTATATGATGAAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F17820g_CDS-001

Protein length: 459 aa.
Product: NADP-glutamate dehydrogenase or glutamate dehydrogenase (NADP+), putative

>YALI0F17820g_CDS-001 MNYPAEPEFQQAYDELYNSIHDSTLFDKHPEFEKVIPVVSVPERIIQFRVVWEDDQGKLQ
VNRGYRVQFNSALGPYKGGLRFHPSVNLSILKFLGYEQIFKNALTGLNIGGGKGGADFDP
KGKSDAEIRRFCYAFMGELHRHIGADTDVPAGDIGVGGREVGFLFGAYKKYKNTWEGVLT
GKGLTWGGSLIRPEATGFGLVYYVEKMIEYATSGKESFKGKRVAISGSGNVAQYAALKVI
ELGGNVVSMSDSKGALVLVSDFTEGFTPAEIEQIADIKLQHKELASLYPSATLPETKFKY
IEDARPWCHVGKVDVALPCATQNEVSGEEAKSLVAAGCKFIAEGSNMGCESDAIEVFEAE
RMARPNGIWYGPGKAANAGGVAVSGLEMAQNSQRISWTKEEVDQKLKDIMVDCFNTCVET
ASTYSSEKVDGLPSLVKGANIAGFLKVSAAMKDHGDFW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG