YALI0F16918g

Overview

Description weakly similar to uniprot|P53304 Saccharomyces cerevisiae YGR212w SLI1 N-acetyltransferase, confers resistance to the sphingolipid biosynthesis inhibitor myriocin
Locus type CDS
Locus tag YALI0F16918g

Location

Species Yarrowia lipolytica Positions 2271228..2273069
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1842 (nuc.)
Previous locus YALI0F16896g Next locus YALI0F16940g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16918g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16918gYALI0F16918g_mRNA-001YALI0F16918g_CDS-001

Nucleotide sequence

 

>YALI0F16918g
ATGTCTCGACAACTTGGTGAGTGGCGGTAGATGGCGAGGTGGTGGAGAAGGCGTGGTCGA
AGATGGCAGACAGACTCCCGCGGCTGCCAACGCGAGAGAACCGACGTAAATCACGCCCAC
AAGTAGACACGGTACAACACCAACATGCCACTGCGGAATGTGGAATGTGGTGGTGTGGTG
GACCACACTTGCAACTACAATACTAACTACAGGACCCCTAGAACGACTCATGGCGGTGAG
AGCCCAGCTCGGGCTCTACACAAACGTCTGGGTCTCTGCAGAGCTCGATGAGCCTGTGGA
ACTGAACGTACTCTACCAGGCCGTGGCCGACGTGATCATGGACGAACCCATGCTCGGTGT
CGTGGTCACTGGACGAAAGGAAAAAGACCTGCGCTTCACCAAACTCAAGGGCATCAGAAT
ATCCGACGCCGTGTCTCTTGAGTACTTCAACGAAGAAAACATCGCCAACATCCACACCCA
ACTCCACGACATTCAGTTTGATCTGCAAGGTGATAAGCCCCTTTGGAGAGTCTTCCCCAT
CAACAAGGGCAAGGAGCTTGTCTTCGTCTACGACCATACGCCCCTGGATGGCATGTCCGG
AGCCTCTGTCTGCGTCAAGCTCGCCAAGGCATGTCAGAATGTCCGAAACCCGTCCGTGTC
ACGACATGACGTGGCCCTTGTGTCTGGAGCTCCCATCCCACCACCCCTGGAGGGCCAGAT
GAACGTCTCCGTGCCCTACTGGAAGCTCTGCGTCGCTCTCATGGAGGAATACGCCAAGCC
GCTGTGCACCTTTGCCACGGCTCTGCGTCGACTGGTCTACTCGAAGGAGGTGGACCAGTA
CCGATTTGGAACCGGTCCCAAACACAAGAAGAAGTGGACTGGACGATACTCGCTCATCGA
CATTGACAAAGCCAAGACCAAGCGTCTGCTCGACACGTGCCATAAGAACGAAGTGTCTGC
GTCGGCTGTTCTTTTTGCCGTGCTCGTGTCTGCCTCTTCGGACACTCTCTACAGACACTA
CCCCGTTTCGTCGTCCAAGATGCGGGCCAACGCACGTATCCCATACAACGCGCGTCAGTT
CATCCGAAAGGAGCAGCTGGCATCGTTGGGATGCATGGTTGGAGATGCAGAGCTGCAGAC
GGTGGTACCCCCACCCAAAAACGTGCAGAAGAAGGGATACTACAAGTCGAAGGAGTTTTT
CGATATTGCCCGAGGGTTCCGATCGTCGGTGCTCGAGAACATTGCCAAGTCCCGCCCTGA
CGACTGTCCTGCCGCCATGCACGACATTGGCATGATCCAGTTTGTCCCCTCTATCAAGGA
CTTCTTTGAATCCCACACTGAGGGAGCTGCTCGTTCGGAGCTTTTCTCTATCTCCAACCT
TTGTGCCGTGGATCCCTGCGGCACCAACATTGAGCGACTGCGCTTCTCTCAATGTACTGG
CGCTAACTGTGCGTTCCTGCAGTTTGGAGCCGTCGGAGTCAAGGGAGGCGCTCTTTCTGT
GTCCATCTCTGCTGCCGACGACCCCGATGACTGTCTTGGCGATCTCACCAAAGAGGTTCA
GCGATTCGTTGACCAGTTGTGATGAGATGATGATATTTATTATTGTTATTTTATTGTGCA
TTATACGGGATGCGGCAACCTCGAGTTTGAAACTCCACCATGGCCTCAGTCGACCCACCC
GGCGTGGGCTGGCCATGATATTTATACGCGCATGACTATTTGAGCAGACCGGCGTGTCTG
CTCCACCGCTACTCAGTGGTATCTCTCTACTAACGTCTACTTAGATAGACCCAGGAAACT
GGATTGGGCATAGATAATACAGGATAAGGATTAATTATTGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16918g_CDS-001

Protein length: 462 aa.
Product: Conserved hypothetical protein

>YALI0F16918g_CDS-001 MSRQLGPLERLMAVRAQLGLYTNVWVSAELDEPVELNVLYQAVADVIMDEPMLGVVVTGR
KEKDLRFTKLKGIRISDAVSLEYFNEENIANIHTQLHDIQFDLQGDKPLWRVFPINKGKE
LVFVYDHTPLDGMSGASVCVKLAKACQNVRNPSVSRHDVALVSGAPIPPPLEGQMNVSVP
YWKLCVALMEEYAKPLCTFATALRRLVYSKEVDQYRFGTGPKHKKKWTGRYSLIDIDKAK
TKRLLDTCHKNEVSASAVLFAVLVSASSDTLYRHYPVSSSKMRANARIPYNARQFIRKEQ
LASLGCMVGDAELQTVVPPPKNVQKKGYYKSKEFFDIARGFRSSVLENIAKSRPDDCPAA
MHDIGMIQFVPSIKDFFESHTEGAARSELFSISNLCAVDPCGTNIERLRFSQCTGANCAF
LQFGAVGVKGGALSVSISAADDPDDCLGDLTKEVQRFVDQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG