YALI0F16896g

Overview

Description similar to uniprot|P40260 Saccharomyces cerevisiae YGR121C (ohnolog of YPR138C) MEP1 ammonia permease of high capacity and moderate affinity
Locus type CDS
Locus tag YALI0F16896g

Location

Species Yarrowia lipolytica Positions 2260658..2262258
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1601 (nuc.)
Previous locus YALI0F16880r Next locus YALI0F16918g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16896g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16896gYALI0F16896g_mRNA-001YALI0F16896g_CDS-001

Nucleotide sequence

 

>YALI0F16896g
ATGGAGATGCTGGAGAAGCGAGGAGGTGATGTGTGGCAATACACTTACGATACTGGAGAT
GTGGCCTACATCACCGTGTCCATGTGCATGATTCTGGTCATGATTCCAGGCCTGGGTTTT
CTGTACTCGGGTCTGGCCCGAAGAAAGTCGGCGCTGTCTATGATCTGGGTGTGTTTCATG
GGCGCCATTGTTGCCCAGATTCAGTGGTACTTCTGGGGATACTCGTTGGCCTTTTCTCCT
TCTTCTAACCGGTTTATCGGCAACCTGGACAACTTTGGTCTTAAGAACATTCTCAAACAC
GAGGACGGCAGTCGCAAGTACCCCGAGCTGCTGTTTGCCGGCTTCCAGGGTATGTTCTGC
TCTGTGACCGTGGCCATTGTGGTGGGAGGTGTGGCCGAGCGAGGTCGTCTGCTGCCCGCC
ATGATTTTTGCATTCTGCTGGGCCACCATTGTCTACTGCCCCATTGCATTCTGGATCTGG
GGCCCCAACGGATGGGCTGGAGCTCACTGGGACGTGCTGGACTTTGCAGGAGGAGGACCT
GTGGAAATTGCATCTGGTATCGGAGGTCTGGCATACTCTTTTGCTCTTGGCCGAAGAAAG
GAACAACTGCTGCTCAACTTCCGACCCCACAACGTGTCTCTGGTGACCATGGGAACCGCT
CTACTGTGGTTTGGCTGGCTGGGATTCAACGGAGGCTCTGCTCTTGGCTCCAACCTGAAG
GCGGTCTACGCTGTGTGGAACTCCAACATTGCCGCCTGCTTTGGTGCTCTGACTTGGTGT
CTGCTGGATTTCCGGCTCGAAAAGAAGTGGTCTACCGTGGCCATCTGTTCCGGTATTATT
TCGGGGCTGGTTGCTGCTACTCCCTGTTCTGGTATCATTCCTCTGTGGGCCTCTGTCCCT
CTCGGTATCGTTGCAGCAGCGATTTGTAACTTTTCTACACAAATCAAGTACATTCTCAAG
ATTGATGATTCCATGGATACCTTTGCTGAGCACGGCGTCGCAGGAATTGTCGGACTCATT
TTCAACGCCTTCTTTGGAGCCGACTACGTGATTGGCTTGGATGGATCCACTCCTCACGGA
GGAGGATGGGTGTCCAACAACTGGAAGCAGATCTACAAGCAGATTTGTTTTGTGTTGGCC
GCCTCTGGATACACCTTTGTCATGACTGTCGTGCTCTGCTACGCCATCAACTTCATCCCC
GGCTGCAAGCTGCGAGCATCTGAGGAGGCCGAACTTCGAGGAATGGACGAAGACCAGATT
GGAGAGTTCGCCTACGACTACGTCGAGGTCCGACGAGACTGGCTGGCTTGGACTCCCCCC
ACCAAGTCGCACATGCACGATGAGCCTGAGCACTCGACCGATGCCGACGCGATTGAGGCC
AACGCCGACGTCCTGGCCGGCTCCAGTCCAAACGACCAGAACTCGTCCATGGAACAACCC
CCCACTTCTTCCCAGGCCACCTCGGCCGACGATGAAAAGAACGGAATTCATCCGTAATTG
CATTATTTATTCTAACAGGTTGGTATACATGAGTTGAAACTGTACAAAGTGGTAGCACTA
TCGTAATAATAACACGGCTGAGGCAAATAAGTCTTTAGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16896g_CDS-001

Protein length: 499 aa.
Product: Ammonium permease, putative

>YALI0F16896g_CDS-001 MEMLEKRGGDVWQYTYDTGDVAYITVSMCMILVMIPGLGFLYSGLARRKSALSMIWVCFM
GAIVAQIQWYFWGYSLAFSPSSNRFIGNLDNFGLKNILKHEDGSRKYPELLFAGFQGMFC
SVTVAIVVGGVAERGRLLPAMIFAFCWATIVYCPIAFWIWGPNGWAGAHWDVLDFAGGGP
VEIASGIGGLAYSFALGRRKEQLLLNFRPHNVSLVTMGTALLWFGWLGFNGGSALGSNLK
AVYAVWNSNIAACFGALTWCLLDFRLEKKWSTVAICSGIISGLVAATPCSGIIPLWASVP
LGIVAAAICNFSTQIKYILKIDDSMDTFAEHGVAGIVGLIFNAFFGADYVIGLDGSTPHG
GGWVSNNWKQIYKQICFVLAASGYTFVMTVVLCYAINFIPGCKLRASEEAELRGMDEDQI
GEFAYDYVEVRRDWLAWTPPTKSHMHDEPEHSTDADAIEANADVLAGSSPNDQNSSMEQP
PTSSQATSADDEKNGIHP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG