YALI0F16401g

Overview

Description weakly similar to uniprot|P22580 Saccharomyces cerevisiae YDR242w AMD2 amidase
Locus type CDS
Locus tag YALI0F16401g

Location

Species Yarrowia lipolytica Positions 2192338..2194125
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1788 (nuc.)
Previous locus YALI0F16379g Next locus YALI0F16423g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16401g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16401gYALI0F16401g_mRNA-001YALI0F16401g_CDS-001

Nucleotide sequence

 

>YALI0F16401g
ATGGGTTACTTTTACGTCAAAAAGACTATCAAGGCCAAACAACAGGAGCGGGAGGACCGT
ATGGCGGCCCTGCCCGAGTACAACACTCCTCTGACCTCCAAGGAGCGAGACATTCTCAAG
CAGGACGCCGAACATGTCGTGAACCAGGTTCAGAGCGGCGATCTCAAGGCCCCCGAGGTG
CTCAAGGCTTACGGAAAGATGGCCTTCAAGGCCCAGCGACACTGCAACCCCGTCACCGAG
ATCATGATCAAGGACGCCGAAAAGTGGGCCGCCAACACAAACACAGAGGGATCTCTGGCC
GGCTTCCCCATCTCTCTCAAGGATACTGCCGGTGTTACCGGTTACGATTCTTGCATGGGA
TACACTGGCAAGTGCTTTAAGCCCTTCACCAAGGACGCCCCCATCATCCGACTACTTAAG
GACTGTGGTGCCGTCCCCTTCGTCAAGACCAACGTCCCCTACACCCTGCTGTCGTTCGAG
TCCTACAACGACGTCTGGGGCCGAACTGATAACCCCCATGTGCCCGGTCACTCCGCCGGA
GGTTCCACTGGTGGAGAATCCGCCTTGCTGGCTTACGGAGGCTCTCGTCTCGGTATCGGA
ACCGATGTCGCCGGATCCGTTCGACTGCCCTCCCATTTCTGTGGTATCTACACCGTCAAA
TGTTCCACTGGTCGATTTCCCAAGGCTGGCAACAACACCACCATGCCTGGACAGGAAGGT
ATCCCTGCTGTGTACTCGCCCATGACCCGAACTCTGGCAGATCTCAAGTTCTTCCTCAAG
GCCATTGTTGACCAGAAGCCCTGGAACTACGACTACTCGTGTCACCCCATGCCCTGGACC
GAGGCCAACCTGCCCAAGAAGCTCAAGTTTGGCGTGATGTACACTGATGGTATTGTGGAC
CCCTCCCCCGCCTGTGCTCGAGCTCTCAAGATGACCGTTGACGCCCTGGAGGCTGAGGGT
CATGAGACCGTCGAGTGGGTGCCCCCCAACTCCCTGGACTGCCTGCGAATCGCCTCTCAG
CTTCTTGTTTCCGACGCTGGAGCCATCTCCACCCGTGACCAGATCTGGCCTGAGAAGAAC
GATGTCGGCGTCGCCAGAATGTTCTTTGCCTGCAACCTCCCCCGATGGATGAAGAAGATT
TGGGCCTGGTACCTTGAGCACATTAAGGGTGACAAGGTGTGGGCCGCTCTGGTGCGAGAC
TTCAACAAGAAGACCATTACCGAACGATGGGACCTTGTCTACGAGCGGGAGGGATACAAG
AACAAGTACTTCGAGCAGTGGCAGGAGTCTGGAATCGATTTCCTCATCACTGTCCCCAAT
GCTACCCCTGCGTTCCCTCACAACGGTCTCTACGAATCCATTTCTTCCTGTGGTTATACC
TTCATGTTCAACCTCCTCGACTACTCTGCTGGTGTCCTTCCCGTGACCAAGGTTGACCGA
GAGCAGGACAAGCTGCCCGCCGTGTTCAACCTCAAGAAGCTCAACGCTGTCGCTCGAGGC
GCCTACTCTCAGTACAATGCTGAGAAGATGCATGGTCTCCCCGTCGGAGTGCAGGTCATT
GCTCCCCGACTCAAGGAAGAGGACTGTATTGCCGCCATGGAGGTGGTTGAGGGTGCCCTG
AAGGCCAAGGGCATTAACTACCCTCTGTTGAACGAGTAATTTTTCCGCATATAAAACTAA
TGAAGAGATGATCTATTGACACACGGGGTTGGGCTGTAGAAGTACCAGTGCTGTTCGCAG
TAGTTTCTAGGAAACAAACAGTCAAGAAACAATCAATTATAACTTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16401g_CDS-001

Protein length: 553 aa.
Product: Conserved hypothetical protein

>YALI0F16401g_CDS-001 MGYFYVKKTIKAKQQEREDRMAALPEYNTPLTSKERDILKQDAEHVVNQVQSGDLKAPEV
LKAYGKMAFKAQRHCNPVTEIMIKDAEKWAANTNTEGSLAGFPISLKDTAGVTGYDSCMG
YTGKCFKPFTKDAPIIRLLKDCGAVPFVKTNVPYTLLSFESYNDVWGRTDNPHVPGHSAG
GSTGGESALLAYGGSRLGIGTDVAGSVRLPSHFCGIYTVKCSTGRFPKAGNNTTMPGQEG
IPAVYSPMTRTLADLKFFLKAIVDQKPWNYDYSCHPMPWTEANLPKKLKFGVMYTDGIVD
PSPACARALKMTVDALEAEGHETVEWVPPNSLDCLRIASQLLVSDAGAISTRDQIWPEKN
DVGVARMFFACNLPRWMKKIWAWYLEHIKGDKVWAALVRDFNKKTITERWDLVYEREGYK
NKYFEQWQESGIDFLITVPNATPAFPHNGLYESISSCGYTFMFNLLDYSAGVLPVTKVDR
EQDKLPAVFNLKKLNAVARGAYSQYNAEKMHGLPVGVQVIAPRLKEEDCIAAMEVVEGAL
KAKGINYPLLNE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG