YALI0F15829g

Overview

Description similar to uniprot|Q08444 Saccharomyces cerevisiae YOR056c
Locus type CDS
Locus tag YALI0F15829g

Location

Species Yarrowia lipolytica Positions 2134918..2136332
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1415 (nuc.)
Previous locus YALI0F15807g Next locus YALI0F15851g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15829g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15829gYALI0F15829g_mRNA-001YALI0F15829g_CDS-001

Nucleotide sequence

 

>YALI0F15829g
ATGTCTGCTGAAGAAGTGAAACCCGTGACGCCGGCATCTACAGCCTCCGGTGAGAAGCAG
ATTAACTCGTTGGTTCTCGATGCGGGACCTCTTATCACCCAATCCTTCCAGACTCTCCAC
AACATGGCCGACCATTTCTACACCACTCCCTCAGTTATCACCGAGCTGAAGGACGACAAT
TCTCGAGCCAACCTGCTGCTATGGGGCGATCGACTGGTCATTCGACAGCCCAAGGCCGGT
TCCGTCAAGGCTGTTTCCGATGTCGCCAGATCGACCGGTGACTACGGAGTTTTGTCTTCC
ACCGATATTGCTCTGATTGCTCTGGGATACGAGATTGACGTTGAGCTCCACGGTGGGGTT
GAACATCTCAAGGCTGTGAAGCAGCAGCCCCAGGAGGTTACACAAGCTGAGGATACCGAG
CCTGTCGAGTCTGAGGAGGATAAGGAACAGGAGCAGGAACAGGAGCAGGAGCCCGAGCAG
GAGCCCGAGCAGGAGGAGCCTGGGAAGGAAGAGGAAGATGATGGATGGGAGACTGTGACG
AAAAAGTCTAGAGCTCCCCGAAAACAGGGCAAGAAAGTTGGAGGTAGCACTTTCTGGGGT
AACGCCGGTCTCACCCAGCCTGCCAAGGAGGACAAGCCCGCTATTCCCTTTGAGTACGAC
AGTGAGGACGACAGTGATGGAGGAGAGTGGATCACTCCCGAGAACTTGCAGGAGTCGCTT
ATCAAGGATGCCGGACAGGTTGTTGACGACGATGTCGAACCTGAACATATTCTGGCTGCC
ACCTCTACGGGTGATTTTGCCATGCAGAACGTCATTCTCAAGATGGGCATGGTTCTTGTG
AACGCTACCAATGGCCGACAGATTCAGCGAATCCGAAACTCCATGCTGCGATGCCATGGA
TGTTTCCATCTTCTGCCCTATCCCAAGGACGGTAGCGTCAAGCACTTTTGCCCCAAGTGT
GGAGGAAACACGCTGATGCGATGTTCCGTCACGGTTGGAAACGACGGCAAGATCCAGGTG
CATCTCAAGAAGAAGATGAACTGGTCGACCCGAGGCAACAAGTACACTCTGCCCAAGCCC
CAGTCAAAGAACAGTCGACACCAGCGACAGCCCGAGTTCAACGATGTGTTGCTGAGAGAG
GACCAGAAGGAGTACGCCAAGGCCATCAAGAGCGACGAATGGAAGCGTCGACAGAACGAG
AAGATTCTCGATCATTGGATCGGAGGAGGCTCTGCCGAGAATGTCATGTCTCCCTTTGCT
GCCACTGGTTCTGCTCGAGAAGCTACCAGACATACTGGTGTCAAGGTTGGTCGAGGACGA
TACGTTAACAGTAATAAGAAGAACCGAAAGTAGACGGCCAATGGGGAACAATGATGGGAA
GGAGGTGATAGAGTAATGCATTTGTTTTATTGATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15829g_CDS-001

Protein length: 451 aa.
Product: Protein involved in proteasomal and 40S ribosomal subunit biogenesis, putative

>YALI0F15829g_CDS-001 MSAEEVKPVTPASTASGEKQINSLVLDAGPLITQSFQTLHNMADHFYTTPSVITELKDDN
SRANLLLWGDRLVIRQPKAGSVKAVSDVARSTGDYGVLSSTDIALIALGYEIDVELHGGV
EHLKAVKQQPQEVTQAEDTEPVESEEDKEQEQEQEQEPEQEPEQEEPGKEEEDDGWETVT
KKSRAPRKQGKKVGGSTFWGNAGLTQPAKEDKPAIPFEYDSEDDSDGGEWITPENLQESL
IKDAGQVVDDDVEPEHILAATSTGDFAMQNVILKMGMVLVNATNGRQIQRIRNSMLRCHG
CFHLLPYPKDGSVKHFCPKCGGNTLMRCSVTVGNDGKIQVHLKKKMNWSTRGNKYTLPKP
QSKNSRHQRQPEFNDVLLREDQKEYAKAIKSDEWKRRQNEKILDHWIGGGSAENVMSPFA
ATGSAREATRHTGVKVGRGRYVNSNKKNRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG