YALI0F15807g

Overview

Description weakly similar to uniprot|P33411 Saccharomyces cerevisiae YGR006w PRP18 U5 snRNA-associated protein
Locus type CDS
Locus tag YALI0F15807g

Location

Species Yarrowia lipolytica Positions 2132758..2133930
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1173 (nuc.)
Previous locus YALI0F15791r Next locus YALI0F15829g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15807g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15807gYALI0F15807g_mRNA-001YALI0F15807g_CDS-001

Nucleotide sequence

 

>YALI0F15807g
ATGGATTTTGCAGCACTGATTCAGGGCGAAATCTCCAAGAAGAAAGCTGGAACGGGAGTG
GCAGACTACGGCTGTAAGGCAGCGGCTCCCAAGCCCGCCCAGACGACAGTTTCCGACAAC
TCAGACGACCTCAAGCGCCTGGAACGGCTGAAGCAGATGAAGCGACAGAGAGAACTTGAC
CGGGAAGAAGAGCGACTTGAGCGAGAAGAGGCCAAGAGAGCCAAGCAGGAATCTTTGGCC
AAAGCACCAGCTTCCACAACATCTACCGTATCGACAGAGCATGATGTGGCAACATCGGAA
CCAATAGAGACAGTGGAAGAAATGGCTGCCAATGACGCGAGAACAAACGTGCGAATCGAC
TGGAGTGACGTAGCCACAAAGAAGGATGCCACAAGGGATTCGGAGACCAAGAAAAAGCTC
GCCATGCAGCTGAGAGTGTTTCTGGCACGGTTATTGAGTGAATGGGAGGGTACTTTGGAT
AAGGGAGCTGCAGCCCAGGCCAGTGGAGCGGCCGAAGAGGTCTCCGAGGCAGCAAACGCT
TACAAGCGACACACTATCTTCGAAGAAACGCAGACCTCTCTATCTTCTCTCATGGTCTTA
TTACGACACAATGGTCTCCAAGACGAAGTTCTGGCTATGCTTTCAAAGGTCATGTACCAT
GTGCAACATGAGGAACACCACCAGGCCTATGATGTCTATCTTAAATTGTGCATTGGAAAC
GCCTGTTGGCCCGTTGGAGTGGCTTCCATTGGCATTCACGCTAGAGCGTCTCAGAACAAG
ACTATTGCTTCAGCCCGAAACTCGAAGCAGGTGGCACACATTGTCAATGATGATACGAGG
CAGTGGCTTGTGTGCATTAAACGGCTATTGACCTTTGCTGAGGGCTACGAGAGTTGTGTG
AGAAAGGCTTTGTTGACTGTTGTGGATATGGAGGATCGGGGGAACCGAGTCAACGAACCG
CGAGGAAGGGATGTCAAGGGGACAGTCCTGGAGGAGGCTGGGGTTGATGGCAATTCCGAG
ACTGACCAGAATGCTGAGGTTGAACAGAAGGAAGCCTCTGAGTAAGTAACCTCCTGTCCT
GTGCTCTGCATCATGGGTCGTGTGTTGATTGCTAGAGAGAAGCTGCTTCCACCCATTAAA
TTATTAATCATTGTATTTTTTGCATTTTGTTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15807g_CDS-001

Protein length: 355 aa.
Product: Conserved hypothetical protein

>YALI0F15807g_CDS-001 MDFAALIQGEISKKKAGTGVADYGCKAAAPKPAQTTVSDNSDDLKRLERLKQMKRQRELD
REEERLEREEAKRAKQESLAKAPASTTSTVSTEHDVATSEPIETVEEMAANDARTNVRID
WSDVATKKDATRDSETKKKLAMQLRVFLARLLSEWEGTLDKGAAAQASGAAEEVSEAANA
YKRHTIFEETQTSLSSLMVLLRHNGLQDEVLAMLSKVMYHVQHEEHHQAYDVYLKLCIGN
ACWPVGVASIGIHARASQNKTIASARNSKQVAHIVNDDTRQWLVCIKRLLTFAEGYESCV
RKALLTVVDMEDRGNRVNEPRGRDVKGTVLEEAGVDGNSETDQNAEVEQKEASE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG