YALI0F14553g

Overview

Description similar to uniprot|Q9USQ7 Schizosaccharomyces pombe Conserved hypothetical protein
Locus type CDS
Locus tag YALI0F14553g

Location

Species Yarrowia lipolytica Positions 1943055..1944854
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1800 (nuc.)
Previous locus YALI0F14531g Next locus YALI0F14570t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14553g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14553gYALI0F14553g_mRNA-001YALI0F14553g_CDS-001

Nucleotide sequence

 

>YALI0F14553g
ATGAAATTTGTTGCTCTCGTGTCCGGTGGAAAGGACTCGTGCTTTAGCATTCTACAATGC
ATAGCAAACAACCACGAGCTGGTTGCTTTGGCCAACTTACATCCACCTCAGCAAGAGACT
CATGAGATGGACTCCTACATGTACCAGACAGTTGGTCACAACGTGGTAGCACAATACTCC
GATTTATTGGGCGTTCCACTCTACAGGAAAGCCATTAAAGGTAGTGCTGTTACACAGAAG
CTGGACTATGCACCCGTCAACAATGACGAAACAGAAGACCTATACGAACTCTTGACAACC
GTCTTGGAAGACCATCCCATGGTGAAGGCAGTGTCTGTAGGTGCCATTCTGTCTTCTTAC
CAAAGAACAAGAGTTGAGAATGTCTGCCAGAGACTCGGCCTAATATCCCTATCTTACTTA
TGGCAGCGAGACCAGGTGGAACTCCTTGATGAAATTGTCAAGAGTAAACTGGATGCCAGG
ATAATCAAGGTGGCGGGGATGGGCTTGAAACCCCAGACCCACATTGGTAAAAGTTTGGCT
GACATTCAACAAGAGCTTTTGCTTCTTCACGAGAGGTTTGGATTGCATCCATGCGGAGAA
GGCGGCGAGTATGAAACGCTTGTGCTAGGCGGACCTTCATCTCTATTCAAAAAGAAGTTG
ACGATCGAGAAACTGCATATCGAAGAGGACAAAGCCGATGTCGCTTATGCAAAAATGCAG
GTGATGGTTGAAGACCAGGAAAAACTCGAGGGAGAGATTGTTATTCCTGAGCTGCTTGAT
GAAGAGTTTGAAAACCTCAAAAAAATGTTGGATGGGGGAAAAAACTTCGAACCCATAAAC
GCAGAGCAGACGGAAACATACGAGGTCTCATTAACCGCTTCTTCAAATTCAGAAATTATC
ATTCTAGCAGGCATTTCTGGAGAGATCGGTGAGATCATGGAGAAGGTATGCGACCACCTG
CGCACAATGGGGCTATCACTGGAGAACATCACCTCAAGTTCTCTTATTCTCAACGATATG
AGCGACTTTGCTGAGGTAAACGAAATATACTCTTCTTACTTTACGGCTCCACTTCCGCCC
GCGCGTGTTTGCATCTCTGCTAGATTGCGTGAAGGAATAAGGTGCCAGCTATCGGTATCT
GCAACACGTGACTTGGGCTCCAAAACCGGTCTTCATGTCCAATCTCGTTCATACTGGGCG
CCGGCTAACATTGGACCCTATTCCCAGACGATTTCCTCTGGCGAGGTCACATACCTGTCT
GGACAAATCCCTCTAATCCCTGCCTCCATGAGCTTGGTTGAAGAGCCAGGCCTGGCAGCT
GTACTATCTCTGCAACACCTGACCCGCGTGGCTCGAGAGGTCAAAAGTGATTTTGCGGCG
GTGGTGGGCTTCACCAGCTCCCCTGCCCTTATTCCGATTGCAGAAGAAACTTTCACATCT
TACTCACCTGGAACCCCTTTAATCCTTGCAAGTGTAAAAGCTCTTCCTCGAAACGCCCTT
ATTGAATGGGCGGCCTTGGCATACAAGAACTCTTATTACTTGGGCCAACGTGAAAACATC
AAGTTAGTGTCTGTCTCCGGTTGCACATCCATCTCGTCCGTGCTGCAGTCGATTTCACCT
GACGATGTCATCAGTGTGACATTATATGCAACCAACACCAGTCTAACAAACGACATCAAT
ACCGCGCTGGAGGTGATTCAATGCAACACTGTCAGTTGCCTTGGTAGCACATGCGATGCA
GCTGTTGTCCGCTACCGTCAGGATGTAGATATAGACTCGGAATAAATTCCATTGCGTTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F14553g_CDS-001

Protein length: 595 aa.
Product: Conserved hypothetical protein

>YALI0F14553g_CDS-001 MKFVALVSGGKDSCFSILQCIANNHELVALANLHPPQQETHEMDSYMYQTVGHNVVAQYS
DLLGVPLYRKAIKGSAVTQKLDYAPVNNDETEDLYELLTTVLEDHPMVKAVSVGAILSSY
QRTRVENVCQRLGLISLSYLWQRDQVELLDEIVKSKLDARIIKVAGMGLKPQTHIGKSLA
DIQQELLLLHERFGLHPCGEGGEYETLVLGGPSSLFKKKLTIEKLHIEEDKADVAYAKMQ
VMVEDQEKLEGEIVIPELLDEEFENLKKMLDGGKNFEPINAEQTETYEVSLTASSNSEII
ILAGISGEIGEIMEKVCDHLRTMGLSLENITSSSLILNDMSDFAEVNEIYSSYFTAPLPP
ARVCISARLREGIRCQLSVSATRDLGSKTGLHVQSRSYWAPANIGPYSQTISSGEVTYLS
GQIPLIPASMSLVEEPGLAAVLSLQHLTRVAREVKSDFAAVVGFTSSPALIPIAEETFTS
YSPGTPLILASVKALPRNALIEWAALAYKNSYYLGQRENIKLVSVSGCTSISSVLQSISP
DDVISVTLYATNTSLTNDINTALEVIQCNTVSCLGSTCDAAVVRYRQDVDIDSE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG