YALI0F14531g

Overview

Description weakly similar to uniprot|Q4WC72 Aspergillus fumigatus CCCH zinc finger protein
Locus type CDS
Locus tag YALI0F14531g

Location

Species Yarrowia lipolytica Positions 1941421..1942662
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1242 (nuc.)
Previous locus YALI0F14520r Next locus YALI0F14553g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14531g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14531gYALI0F14531g_mRNA-001YALI0F14531g_CDS-001

Nucleotide sequence

 

>YALI0F14531g
ATGTCATCACAACAAAAGCTGATAGAGGAAATCGCGTCCCTCAGAGATGCCCTGAGTGCC
AACAAAGAGACTAGGTACAGCGGAGGGTCCCAGGATACCCAAGGTGGTTACTATAGAGGA
AGAAGTGGATATGGAACCCACAGGGGCGGTTACAGAGGTCGAGGTGGCTACAGAGGAGCC
TACAGAGGAGCTTACAGAGGAACTTATGGAGGAAGCTACAGGGGGCGGGGCGGATATTCT
GGTGGTGTGACGAAGTTTCAGAATCAGACCTATGTCCCTCCCGCTGTTGCTGCTGAGGCT
GCCGCCAAGGCCGCCAGTGAAGTGCCCAAGGAAGTTGGAGGCAGACTTGATGGACACTCT
TCTTCCGGGAATACCATAGACCCTTCTGTTGCTGCCGCTGCTCTCAACTCTGCCTCTGCT
TCATCCTCTAAAACGATATCCCTCAGAGGTATCCCTTTCACAGCCCGTGGTCATGTTTTG
TTGCGACCTCCTAGTGTGCCTCCGCAGGCGCTTCCTCGATCGGTAGAGTATGATGGCCAT
GTTTATGTGCGAAGTAAAGGAAACCTACATCGTCTCTCGGAAAGACAGAAGCAAGCATAC
TTGTACGCTCAAACACAACCGATTGCTTGTCAGACCCACTAACACAGGAAACGAAAATTG
AAAACCCTCGAGCCATGTAAATTCTTTACCAAAAGCGGCGTTTGCACGCGACCTAGGTGC
AAGCGACAGCACACTCCAGGCCGAGTCGCCGCGTGCAAGTATTATTTGCGAGGCCAGTGT
TCGACATCGAATTGCCCCCTCAGCCATGAACCTAGCGCTCATAATTCTCCGAATTGTAGG
CACTTTGCTCATGGTCTGTGCACTAACCAGAACTGTAGATATTCTCATGTCAAGCACAAT
GATGACGCACCATACTGCTTCTCCTTCAATGATAGTGGATGGTGCGACCGCGGCAAAGAT
TGCCCAGACCGCCACGACATTAAGCCAGAGGGCGCCGTGTATGGTGCTGTCGTCGAAGGC
TCGGCTGTCCCTGCTACAGCCGATCAACTGGATGATACCCAAGATGTGGACTTGGATAGG
CTTGCTCTTATGCTCGATGACGAAGACGAGTCTGGAGAGAGGCATGTCAGCGATAGTGAC
GATAGTGTCGATGAAATATTGCAGCTTGGCAAATATCAGGATGATGGTGCCTTTGTAGCC
GGCGACGACTTCGTGAAATTTTAATATACTATGTTTTGATCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F14531g_CDS-001

Protein length: 393 aa.
Product: Conserved hypothetical protein

>YALI0F14531g_CDS-001 MSSQQKLIEEIASLRDALSANKETRYSGGSQDTQGGYYRGRSGYGTHRGGYRGRGGYRGA
YRGAYRGTYGGSYRGRGGYSGGVTKFQNQTYVPPAVAAEAAAKAASEVPKEVGGRLDGHS
SSGNTIDPSVAAAALNSASASSSKTISLRGIPFTARGHVLLRPPSVPPQALPRSVEYDGH
VYVRSKGNLHRLSERQKQAYLKRKLKTLEPCKFFTKSGVCTRPRCKRQHTPGRVAACKYY
LRGQCSTSNCPLSHEPSAHNSPNCRHFAHGLCTNQNCRYSHVKHNDDAPYCFSFNDSGWC
DRGKDCPDRHDIKPEGAVYGAVVEGSAVPATADQLDDTQDVDLDRLALMLDDEDESGERH
VSDSDDSVDEILQLGKYQDDGAFVAGDDFVKF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG