YALI0F14509g

Overview

Description some similarities with uniprot|Q05050 Saccharomyces cerevisiae YMR031C (ohnolog of YKL050C) EIS1 Component of the eisosome required for proper eisosome assembly
Locus type CDS
Locus tag YALI0F14509g

Location

Species Yarrowia lipolytica Positions 1935411..1939434
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 4024 (nuc.)
Previous locus YALI0F14487g Next locus YALI0F14520r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14509g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14509gYALI0F14509g_mRNA-001YALI0F14509g_CDS-001

Nucleotide sequence

 

>YALI0F14509g
ATGGCCGAAGTGCGCAAGAAGAAGTCCGTGTCATACGACACAAATCCCGTGGAGTACGCT
GCACAGAGGGCATCCGTTGCCTCTTCTGTGTACTCTACGCACAACACTACCAATGGTGTT
GACTTGCCCAACGCCCACACCGACAACAACGAGAGAAGTGCGTCCTTGCGGTCTTCCAAG
TCGACTGCCTCTACTCGTTCTTCAAGCTCCCGACAGCATTACCTGACCGAGAACCAGCAG
CCCAGTGAGGCAGCCATTTACGCCCAGAAGCTGCGATACGGCGTTTACCACGCACCCGGT
TTCCCCACCGTTGGCGTTGAGAAGTCCTCCTCCAATTCTGCTGCCAACCTTGCTGTCGAT
GCTAACCTCTCTCCTAACCTTTGGACCCCTAACAAGTCTGCCGCTGCTGGTGCCGCCGCA
GTTCTTGCTAAGCAGAACAAGGGCCCCGAGGTGTGGAAGCCCTCCAAGTCTGCAGTGGCT
GGTGCTGCTGCAGTTGCTTCGAAGCCCGGAAACGTGGAGGCATTCTACGTGGAGCACCCC
GACACTCGAAAGAACGGTATGTACGCTGCCCAGGCTATGCACCGACGGTCTTCCACAGGT
CTGTCTTCCTCTGCTGCTGCCGCCACTCTCAAACAGGAACAGCAGCACAACTCTGCCCTC
ATGGCTGCCCAGGCCATGCCTAGATCCAGAGACCCCCAGGCTCAGCCCAGATCCACCGAC
ATGGATTTCAGTCACCTGAAGACAATTCCTGCCTCTCGAAACCCCAACAAGCCTGGTCCT
TTTGTGTCACCCAACGAGTCCTCTAACAAGTTCCAGTCTGCCGACCTGGGCTCCATCAAC
CTTGCTGGAATTGAGGCATCCGCTCGAAAGGCTGCCGAGAAGCGACTTAATTCCATTTAC
ATGTCTAACCACTCTGACGCTGGCCTCCACTTTGCCAACACTGGTGCTGCTGCCTCTCAC
CTTCCCTACGACCCAGCCGACCTGCCTGATTCCTACTTCTCCGAGGAGGAGCGACGAACC
CTCAAGGAACGAAAGGCTTTCCTCAAGGACACCCAGGGTCATATCAACCTGCACGCAATT
GCTACTGAGCGAGCTCGCCAGTCCCTGGCCGCCGTTGAGGCTGAGCACACCACCCGTGTC
CCTCACATGAACCCTGAGTACTACCGAGAGGCCCTCCAAATCGCTGAGTCGAAGTATGCT
AAGCGAACTGAGAACCATGGCAAGATCGATCTTGGAGGTGGCGCTTACATGACCCAGGCA
GACATTGACGCCATTGCTGCTAGACATGTCAAGCCCGTTCTCAAGGAGATTGATGAAAAA
GCTACTGCCATGCGAGCCAAGGACGAGCAACAGCGACGTGAGGACGAGGAAACCAAGCGA
AAATACGAGGCAGCCAAGGCTGAGCAGCGACGAAAGAAGCAGGCTGAGAAGGATGCTCGT
GCTGCCGCTAAGGAAAGACGACGAGACAACGAGCGACAGGCTAAGATCCGAGCCGCCGGC
GCAGGAGGCGCCAAGTCGGACTGGACCAACAAGACTGTCATGAAGCCCAAGAGCTACGCA
GCAGCTCCTTCTGCTGCTGCTAATGCTCGAGGTGCTGGCTACACTGCTGGAGCTGGTGCC
GGAGCTGTTGCCGGGGCTGGTGCCGGTGCCGCTGCTGTCTCCAAGTCTTATGGTGGTGGT
GCTGCCACCGAGTATGACTCCGAAGACGAGTACGAGGAGGTTGAGGACGACACCCCTGAT
GCTCCGCTCTTTGAGGGTATCGAGGGTGAAGCTCTTGCCAACAAGTCCGTTGCTCACCAC
ACCAAGCTTGTTTCTGAGCGAATGGCCCGATTCAGAGCTGGCGAGCCTCTTGATGTTGTC
AAGCCCAAGAAGACCAAGAGAGTCAAGAAGGAGCGAGCTGCCCCCGTTGCTGCTGCTACC
CCTAGTGCTTTTGAGGACTCTCCTTCTCGTGGCCAGTTCGATCATTGCACCTCTACTGAG
GCCATTGCCCTGCTCTCGACAGCACAGAACGCCCGACGAGCAGCTCGTCACGTCTCTGGT
GAGAAGGATGAGAACCCTTATGACAACTTCCTTTCCATGATCATTACCAACTCTACTGTT
GATCTGACCAAGCGAAGACCCAAGGGACCTCTGACTCCTGCCCAGGCTGCCGCGTTCTAC
CGAACTGAACCCGCCGAGGAGCCTGTTGCTCCTGCCGCTAAGGCTGCCGCTCCTACTGCT
AAGGCTGCCGCTCCTGCTGCCAAGGCTTCTCCTGCCCCTGCTGCTACTGCCGCTACCCCT
GCTGCCAAGGCTGCTCCTGCCCCTGCTGCCACTGCCGCTGCCCCTGCTGCCCCTGCTGCT
GCCCCAGCTGCCGCTGCCGCTGCCCCCGCTGCCGCTCCCAAGGCTGCCCCCGTTGCAAAG
GCTGCCGCTCCTAAGGCAACTCCTGCTAAGGCAGCTCCTAAGGCCGAGCCTGCCAAGGCT
GAGAAGAAGAAGGGAGGCTTCCGAGCTTTCTTCAGAAACTTCACATCGAACGAGCCCGCT
GCAAAGGAGAAGACTGCTCCCGCAGCCAAGCCCGCTGCTAAGGCCGCTGCTAAGCCAACT
GCCAAGGCCACTCCAGCCAAGCCTGCTGCTGCCGCGGCTGCCGCCTCTACTGGTGACAAG
TTCTACGATTCCAAGAAGGACGCCGCTCCCGCCGCTCCTGCCGCTTCCTCTTCCGAGCCC
TCTGCCGCTGCCTCTGCAATCCCCGGTGCTGGAGTTGGTGCCGCTGCCGCTGCTGAGTTC
AACAAGTTTGCTGATGACGAGGGGGACAATGTCGACGCTGGCGAGACTGCTGAAGGCGAG
GCCAAATTCTCTCCCGAGGATGTGCCCGAGGCCGCTGATGTCACTAAGCCGGAGGTTACT
GATGCGATTGTTTCTGGTGAAGGAGAGCCTGTCGAGGGTGACTTCAACCTCAAGGAGAAG
GAGATTGTGGATCCCGTTGACAACGTTGAGGGCAAGCCCGAGATTGACGCCAAGTCTGTC
GAGGGTGACTTCAACCTCAAGGATAAGGAAATCGTTGATCCCGTCGACAACGTTGATGCT
GGTGCTTCCATTCCTGGTGCTCCTTCTACAAGCCCCGATGCTCATGTCCCTGGTGGTTTC
CACACTGCTGCTGATTCTTCCATCGACAAGGCTGCTGACCCTGTACCCGCCATTGAGGAC
GCTCTTGCCGGAACCTCTGAAACTAAGAATGGTGTCTTCAGCACTTCCGAGAAGAAGCCT
GAGCTCGATATCACCGATGGAGATGCTTCCAATGCTGCCGATGGTGCCTTTAACCTCTCT
GGCAAGGAAATTGCTGACCCCAAGGATAAGGTGGACACTGCCGGCCTTGATCTTCCCGTT
CCTGCCGAGGTCGTTGGTGGCGAGAAGCCTGAGCTGGAGATCACCGATGGGGATGCCTCT
ACCACTGCTGCCGATGGTGCTTTCAACCTTACCGGTGAGGAGATCACTGACCCCAAGGAT
AAGGTGAGCACCGCTGGAATTGATCTTCCAGTCCCCACCACTGTTGCTGGTGGTGATGAG
AATAAGCCGGAGCTTGAGATTGAAGATGACGATGATGAGGAGGATGTCGAAGATGAGCAC
GATTTCGAGCACGATCAGAATGAGCCTGTTACCTCTACTCCTTCTACCACTGCTGCTCCT
GTTCTTTCTGCTGCCGAGCGAAAGAAGAAGAAGAACCAGAAGAAGAAGAACAAGAAGAAG
AAGGCCAACAACAACGAGGGTGGCGTGTTCAAGGAGGATTTTGCTAATAGTCCCTCTACT
GCGAACGCCCCTGACTGGGCTGCAGAGGCTGAGTCGGCTTTGAAGCACGTGCAGGGTGAA
ATCGAGGGTGCTGTCAACGAGGCCCTGAGAAAGTAACCTGTTTGTTTCTCTCACTAATTT
TTGTATGTTGAAATTTCATGGTTTGTATAGTAGTGAATGTATGTGTGTTAAGTATGTTGA
GTGTAGAAATGCACATTATGTTCAAGTACACTGCATCTCTATCTCATGACCATATTATAC
CCGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F14509g_CDS-001

Protein length: 1292 aa.
Product: Conserved hypothetical protein

>YALI0F14509g_CDS-001 MAEVRKKKSVSYDTNPVEYAAQRASVASSVYSTHNTTNGVDLPNAHTDNNERSASLRSSK
STASTRSSSSRQHYLTENQQPSEAAIYAQKLRYGVYHAPGFPTVGVEKSSSNSAANLAVD
ANLSPNLWTPNKSAAAGAAAVLAKQNKGPEVWKPSKSAVAGAAAVASKPGNVEAFYVEHP
DTRKNGMYAAQAMHRRSSTGLSSSAAAATLKQEQQHNSALMAAQAMPRSRDPQAQPRSTD
MDFSHLKTIPASRNPNKPGPFVSPNESSNKFQSADLGSINLAGIEASARKAAEKRLNSIY
MSNHSDAGLHFANTGAAASHLPYDPADLPDSYFSEEERRTLKERKAFLKDTQGHINLHAI
ATERARQSLAAVEAEHTTRVPHMNPEYYREALQIAESKYAKRTENHGKIDLGGGAYMTQA
DIDAIAARHVKPVLKEIDEKATAMRAKDEQQRREDEETKRKYEAAKAEQRRKKQAEKDAR
AAAKERRRDNERQAKIRAAGAGGAKSDWTNKTVMKPKSYAAAPSAAANARGAGYTAGAGA
GAVAGAGAGAAAVSKSYGGGAATEYDSEDEYEEVEDDTPDAPLFEGIEGEALANKSVAHH
TKLVSERMARFRAGEPLDVVKPKKTKRVKKERAAPVAAATPSAFEDSPSRGQFDHCTSTE
AIALLSTAQNARRAARHVSGEKDENPYDNFLSMIITNSTVDLTKRRPKGPLTPAQAAAFY
RTEPAEEPVAPAAKAAAPTAKAAAPAAKASPAPAATAATPAAKAAPAPAATAAAPAAPAA
APAAAAAAPAAAPKAAPVAKAAAPKATPAKAAPKAEPAKAEKKKGGFRAFFRNFTSNEPA
AKEKTAPAAKPAAKAAAKPTAKATPAKPAAAAAAASTGDKFYDSKKDAAPAAPAASSSEP
SAAASAIPGAGVGAAAAAEFNKFADDEGDNVDAGETAEGEAKFSPEDVPEAADVTKPEVT
DAIVSGEGEPVEGDFNLKEKEIVDPVDNVEGKPEIDAKSVEGDFNLKDKEIVDPVDNVDA
GASIPGAPSTSPDAHVPGGFHTAADSSIDKAADPVPAIEDALAGTSETKNGVFSTSEKKP
ELDITDGDASNAADGAFNLSGKEIADPKDKVDTAGLDLPVPAEVVGGEKPELEITDGDAS
TTAADGAFNLTGEEITDPKDKVSTAGIDLPVPTTVAGGDENKPELEIEDDDDEEDVEDEH
DFEHDQNEPVTSTPSTTAAPVLSAAERKKKKNQKKKNKKKKANNNEGGVFKEDFANSPST
ANAPDWAAEAESALKHVQGEIEGAVNEALRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG