YALI0F14487g

Overview

Description weakly similar to uniprot|D5G7G8 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0F14487g

Location

Species Yarrowia lipolytica Positions 1931736..1934485
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2750 (nuc.)
Previous locus YALI0F14465g Next locus YALI0F14509g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14487g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14487gYALI0F14487g_mRNA-001YALI0F14487g_CDS-001

Nucleotide sequence

 

>YALI0F14487g
ATGTCTGACCAGCACTCTGCCCCCTTTCGAAAAGTAGCAGGGTCAGACGTGCTTGAAAGC
TCCAACCCTACGCCAGGCGGCCTGGACATCCCAGAATGTTTACCTGACCCAGGTTGGGAA
AGATCAGAGGGTGGCGGTGGGGTACCAATTTTCCGGCCTACCATGGAGCAGTTTGAGGAC
TTCAATCGATTCATCATGGAGATTGACAAGTGGGGTATGAAAGCTGGCATTGTGAAAGTC
GTTCCTCCCAAGGAATGGCATGAGTCTCTACCTGCTTTGGATGAAGTTGTCAAAGGCATT
AAGATCAAAAACCCGATTGTTCAGCACATCTCTGGCCATGCTGGCCATTTCCGCCAACAA
AACATCGAGAAGCAAAAGTCTTACAACATTGCACAGTGGAAGTACTTGAGTGAGCAGCCT
GACTATCAGCCCCCAGCCAAGAGAGGAGAATCTCGCAAGGACTTCAAGAAACGCAAGAAC
ATACCCCAAGACGATGCCATTTTTGAGGATTTCGACTATAGATTTGATGACTCTGAATTC
ACCACGGAGAGGATGGACTTCTTAGAAAAGATTTACTGGAAAACGATCGCCTACAAAGAG
CCCATGTACGGTGCCGATATGCCTGGGTCACTATTTGACGACAAGACACGCTCATGGAAT
GTGGCCCATTTGGACAACTTGTTGAACCAGTTGGATATCAAGATCCCTGGTGTCAATGAT
GCGTACTTGTACTGTGGTCTGTGGAAGTCGACTTTTGCCTGGCACTTGGAGGATATCGAC
CTGTATTCCATCAACTACATCCACTTTGGTGCACCTAAACAGTGGTACTCTGTAAATCAG
GAGGATGAAGCCAAGTTCTACCAGATTATGGCTGACACCTTCCCAGAAGATCACAAAGCC
TGCAAGGAATTCTTACGCCACAAAACCTTCTTGGTTTCTCCTCAACTGCTGGAGCGCCAC
GGTCTCACTGTTAACCGCCTGCACCATTACCAGGGAGAATTTGTTATTACATTTCCTTAT
GGCTATCATGCCGGCTATAATCTTGGATACAATTGTGCAGAGTCAGTCAACTTTGCCACA
CCTCAGTGGGTTCCTATTGGTAAGCATGCTCATAAGTGTCTTTGTATTTCAGACTCTGTC
GGTCTGGACGTTGAGCGGCTGGAAAGGCGCATGCTCGGTCTACCGTCGGATTCGGACCAC
TCTGAGGATGACGGTCATCAATCCGGAGTGTCTATCGGCACCCCAGATTCGGAAATCGAA
GACCATCTTCTGCCAAAACCTCATTCTCCGTCGAAGCTGAAACCAAAGGCAAGGCCCAAG
TCTGCAACTGGAAGAGGTAGAGGCCGACCCAAGAAGTTCCACAAGGTTGAAGATACGAAG
GCGCCTCTTTTACCTGCTTTGCCAGTTGCTGCCATCGAGCCTGCTCCCAGGTCACTGAAA
AGATCACGTGATACGGGATGCGTTCTATGTCCAAACGAGATTCCTGATTTCGAGACTTTA
CCCCTTGAGTCTTCTCAAGAAAAGATAGCCCATCGAGTATGTGCCAACTTCGTGCCCGAG
ACTCGTGTACAGAATGGTCTTGTGTATGGCTACGATAAGATCCCAAAGGGTCGCCTTGAT
CTCAGATGTGGATACTGCCGTTCCAAGCGTGGTGCCTGTGTTCAGTGCTCTTTCCCAAAG
TGTGTTCGAGCTTATCATGTGACTTGTGCCGACATGGCAGGTGTACTCTGCGAGACTACT
GTCGACCAAGAAACCCCGACAAATGTGTCTATCGACTATAAATGTCGTTTTCATCGGTCC
AAGCGGGAGGCGAAATCCCAAGCCGAACTCGAAAGCTGCCCTGAAATTTACAATTACGCT
TATTCGTTGCTTCCAGGGGAGATATGTCAGTTTCAAATCGGAGGCCTTTCGGACCAGAAA
CGACATAAGCATGTACCTCTTTCCCCATCTCGATATGCAGTTGCTGCAGGGTCTGGTACA
AGCAATATTCTCAATGGTGTTATCAGTGCTGGCGTTGTCAAGGTCAACAACATTAGTGAA
GAGTCTGTTGAGGTAGAGCTACTCCCTCATCGCACAGAGACCTTGGAGGTATTGTGGTGC
TGGCTATTGCCCACGCCCACACCTTCTTTTGGAAGGGGTCAGTCGAATGGTGGCACCACT
CAGGGGTGTTCCTCGCCTATAGCACCTCCATATTCTCCTATTTCACCTGCAACGGACAAA
TCGCTTCATCCGGCTAAATTTTCTGACGAACCAGACTTCCCTTCAGTACTGGACGGCTAT
AAGAATCCGTTAGACACGCGTGTTACTCAGCACATAGACCACCCATGGTATACTGAGTTT
TATGACACACGTAACGACCCCATTCTGCAGAGGTGCATCCATGAAACTTACACCACCAAT
TCCCACCAACGTGATGTGTGCGCTGGTATTTACGGGATGTGGAATGGTGATATATGGTAC
TATATTCCAGAGGTGTCCAGTCATACTAATGACTGTTACAACACTGATATCAATGTCAGA
GTTGCAGCCGATGTGGCTTCCTTCAAGAGAATGAGACGACAGGCGAACCGCATGAAGAGG
AGAAATCAGCCATTACCAGCACACCTTCAATCGCCTCCGCGGCTAGCCCCAGCCCCACCG
CAACAGCAATACTCCCCGCCATTTGGCTTGCCCGTATATTTCCCCACGACCAGTACTAAC
TAACGAACTTCCTGTAAACTATGAGATAATGATTATGAGTTATGACGCGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F14487g_CDS-001

Protein length: 901 aa.
Product: Conserved hypothetical protein

>YALI0F14487g_CDS-001 MSDQHSAPFRKVAGSDVLESSNPTPGGLDIPECLPDPGWERSEGGGGVPIFRPTMEQFED
FNRFIMEIDKWGMKAGIVKVVPPKEWHESLPALDEVVKGIKIKNPIVQHISGHAGHFRQQ
NIEKQKSYNIAQWKYLSEQPDYQPPAKRGESRKDFKKRKNIPQDDAIFEDFDYRFDDSEF
TTERMDFLEKIYWKTIAYKEPMYGADMPGSLFDDKTRSWNVAHLDNLLNQLDIKIPGVND
AYLYCGLWKSTFAWHLEDIDLYSINYIHFGAPKQWYSVNQEDEAKFYQIMADTFPEDHKA
CKEFLRHKTFLVSPQLLERHGLTVNRLHHYQGEFVITFPYGYHAGYNLGYNCAESVNFAT
PQWVPIGKHAHKCLCISDSVGLDVERLERRMLGLPSDSDHSEDDGHQSGVSIGTPDSEIE
DHLLPKPHSPSKLKPKARPKSATGRGRGRPKKFHKVEDTKAPLLPALPVAAIEPAPRSLK
RSRDTGCVLCPNEIPDFETLPLESSQEKIAHRVCANFVPETRVQNGLVYGYDKIPKGRLD
LRCGYCRSKRGACVQCSFPKCVRAYHVTCADMAGVLCETTVDQETPTNVSIDYKCRFHRS
KREAKSQAELESCPEIYNYAYSLLPGEICQFQIGGLSDQKRHKHVPLSPSRYAVAAGSGT
SNILNGVISAGVVKVNNISEESVEVELLPHRTETLEVLWCWLLPTPTPSFGRGQSNGGTT
QGCSSPIAPPYSPISPATDKSLHPAKFSDEPDFPSVLDGYKNPLDTRVTQHIDHPWYTEF
YDTRNDPILQRCIHETYTTNSHQRDVCAGIYGMWNGDIWYYIPEVSSHTNDCYNTDINVR
VAADVASFKRMRRQANRMKRRNQPLPAHLQSPPRLAPAPPQQQYSPPFGLPVYFPTTSTN
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG