YALI0F13233g

Overview

Description some similarities with uniprot|Q12297 Saccharomyces cerevisiae YPL011c TAF47 component of the TBP-associated protein complex
Locus type CDS
Locus tag YALI0F13233g

Location

Species Yarrowia lipolytica Positions 1774893..1775617
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 725 (nuc.)
Previous locus YALI0F13211g Next locus YALI0F13255g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13233g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13233gYALI0F13233g_mRNA-001YALI0F13233g_CDS-001

Nucleotide sequence

 

>YALI0F13233g
ATGTCAGACTTTTACTTTGCTCTGGCCCGCATATCAGTGGCGCAACTGCTTCGAGTGGCC
GGTATCGAACGATGCCCGCCTTCGGTGCTGGACACAATCACAGACCTGTACATTCGGCAT
CTCGATCTGCTGGCGACGGAGACGATGAATCTGGCGCATCACGGAGGCCGATTTGACGCC
ATCATCACAGACGTGGCACAAGCCATGGCAAACACACATGTCATCAAACCAGTGGTGCTA
CTCGACCCCTACGATACCGATCCTCAGGGCGACCAGGGCATGCAGGACTTTGTCAAGTGG
GCCAAGGGACCTGGACCAGCAGAGGCCCGGAGAATCAGCAGAGTAGCAAACAACACTGGC
CAAGCTACACAGCCAGCAGCAGCAATGGCGCCGTCCACGTACGGCATCACGGCGAAAAAA
CAAGAGGACGCCGCCCCCCAGGAAGAGGTGGAGTGGCTGCAGGGACTCATCAACAAACAG
ACCAAGATGGTGGGTCCAGCGCGTTTCAAAGATACCGTGCTAGGACCGTCATTCGAAGAC
AAGCTGGACCTGAAGATTGCAGGAGGACCCAGTATGGAGGAGTTTTTCGAATCGAGACAG
GAGACGACCAAGTCGTGACGGACAAGTATCGCCTGGCTCCGCCCACCACTTTGCATGGCA
CCTGCCCCTTGTATTATAGCATTAATATACAACCCTGGACCTTTTCCTGGCTCAGGAGAC
TACCT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F13233g_CDS-001

Protein length: 206 aa.
Product: Conserved hypothetical protein

>YALI0F13233g_CDS-001 MSDFYFALARISVAQLLRVAGIERCPPSVLDTITDLYIRHLDLLATETMNLAHHGGRFDA
IITDVAQAMANTHVIKPVVLLDPYDTDPQGDQGMQDFVKWAKGPGPAEARRISRVANNTG
QATQPAAAMAPSTYGITAKKQEDAAPQEEVEWLQGLINKQTKMVGPARFKDTVLGPSFED
KLDLKIAGGPSMEEFFESRQETTKS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG