YALI0F13211g

Overview

Description weakly similar to uniprot|P35688 Saccharomyces cerevisiae YDL240W LRG1 Putative GTPase-activating protein (GAP) involved in the Pkc1p-mediated signaling pathway that controls cell wall integrity
Locus type CDS
Locus tag YALI0F13211g

Location

Species Yarrowia lipolytica Positions 1770440..1774752
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 4313 (nuc.)
Previous locus YALI0F13189g Next locus YALI0F13233g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13211g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13211gYALI0F13211g_mRNA-001YALI0F13211g_CDS-001

Nucleotide sequence

 

>YALI0F13211g
CACAGTGCACCATCTTCATACATCGACAGAGGTCCAGACGACAACTCACAACTACAGCCG
GTTCTTCTGTCTGTGGGGCTACACAAGACCACCACCTCACTTATACACTCGTTCAACCTA
AACTTCTCTCAATTCTAAATCCCACCACACGACATCACCACACCTACCGTAATTACCGAC
AACGGAGTGATGTACAACCATCGTGAGGAGCCACCGACCGCGAGAGGTCGTTTCAGACGG
TCATTCTAACACAGTGAGAAATGGAGTCATACAGAGGAAGGGTACGCTACCCTCCTGATG
AGCCTCTCCATCCCCCAGCACTTCCCCCGTCCACTCCGCCAGGATCGGGCTCTCGGTCCC
GGTCAGGGTCAGCCACGGGTATGAACTTCTCGCGGCCCACCAACAAACAGCCTCCCATGC
GACGCTCCTACCACACCCCCACACACTCACGCAACCTGTCGGACGAGCACCCACCAGGCA
CCTACTACTCGCCGCTCAGCTCACCGTCCAAAGACACCCACGACAACAGCAGCCCCCACA
TGAGCATCAGGAGGGTCACCAATGAACCGCCAAAGCCCCAGCCAACGCAACCCATCACAC
AAACACACACACACACACCGTCGCCACTGCCGCCAAAAATCAACCAACAACTCGACCGCC
ACAAGAGCATGATGGTCATGAACGAGTCCACAAACACAGACAAGCCGCCAGTGCCGCAGT
TCAACTTCAACGACAAGCCGCCATCACCAGACCTCGAGCGCTCGTCGTCGTCAGCAGCAT
CCAAATCCACCCGCAAAATCTGCCGCGAATGCAACAAACCGATCTCAGGCCACTTTGTGC
GCGCCCTGGACTCGGTGTTCCACGTTGACTGTTTTCGCTGCGCCGACTGCAACTCGTTGT
GCTCGTCAAAGTTCTTCCCCGTGGATGGAAACGTGCCTTCTACAAACGGAGAAAACACGC
CACCCACGTCGCCAACAACTCAGGTGCCGTTGTGTGAAACGTGTTACTTCAGCAGGCTGT
CGCTCTTGTGTTTCTCATGTGGCGGAGCTCTACGAGGAGCCTATATCACAGCCCTGGGCC
GCAAGTACCACGTGGAACACTTTTCGTGCTCGAAATGCAACTCGGTGTTCGGACCCGAAG
ATTCGTACTACGAGCACCAGGGAGACATTTTCTGCCATTACCACTACTCGACGGACTTTG
CCGCGAAATGCGAGGGCTGCCAAACGTCGATTCTCAAGCAATTTGTCGAAATGTACCGCG
GAGGAAAACAGCAGCAGTGGCACCCGGAATGTTATATGATTTTCAAATTCTGGAACGTGC
GCATTAGCGGGGTGGAAAAGCCGCAGGTAGAATCAAAGGACCTGCTGTCGCTGCTGGAAA
CGCGCATGGAGGAGCGGGTCTTGGGTGTATGGACCACCCTGTGTGGCTACGAAGAGTGCA
CAGCAGCATGTATCTCAGATATGCTACAATACTCAGCGTCGGGTAAGTACCAACTTGCTT
TGTCAGCTACGGCGAGGTTGGTATTCAAGACTGAGCAACTCTTTGTCGGTCTGGACCGTC
TCTTGGCTCTGTGCGGCATTGACGAGCTTGAAATCCACACCAGCAAGCAGCAAGGAATGC
ACCCACCAAAACTCTACGACGATCTTGGAAAGACACCCAAAAAGCTGTGCAAAAAGATTG
TCTCGTTCATGTCCATGGTTTCCAAGGCCAATGAAAAGAAACTACCCAAAATGGGCGTCA
CTCAAGACCTCCTGTCTCTGGTGACCACTCTAGCGCACTATCTCAAGGTACTGATTCGGT
TTGGACTCTCTACAGCGCTACAGCATGACCGCAAAGTCGAGTTCAATGACGCTTCCGGCT
TCTCTCTGTTCCTGAGTGCTGCTCCCACGCGAGAACCGGCAGTAGACGTGCTTCTCGAAG
GTGTATCCAACACAGACCCCTTCGACCAGCCGCTCATGCATCTGGGCGTCACGGCGCTCA
CTCCGGACGTTTGTGTCGCTTGTGGCAAGTCTGTGGAGGACAGCTGTGTTGTTCTGTTAG
ATGTTGCCTCTGGTTCAGCTTCTGCATCCTCCAACAGCTCACAAAAGTCGCATAAAAGCA
AAAGATGGCATTTGGAGTGTTTTAAGTGCTCCAAGACTGGAGCTGTGCTTCGCTCCGGGG
ACGACATTGCTTCTGCTGCTTATGTTGATGGAGAGGTTGTTTCCGAGGGCCATTACCCTC
CTTCCGCCATTCTGCCCTTTGCAGTGGAGACACGTCTTTCTCAGCTCATGTTTCTGGCCA
AAATCGCCCTTGCGCGGCTCAATATTCTCCTAAGTCGAGGCCAACCTCCTGCTGGAGCTT
CTCTCGAGGCTCCCAGACGGTCTTCTGCCCCTGATAACCGTGGAACAGCCGGCTCTGCGA
ACTCCAACCTCAACGACATTCGCAAGTTGCGACCCGATTTGCGTGGTGAGGAACGGCGAG
GATCAGCAGATACCATCGGTGCGACCTTTTCTAAGAGCTCTTCGGACCTGAACAATGATC
TGGACGGCTACAAGATGTCTGACAGTGCTCGACAGAGCCAGACGTCAGCAGCCGAGCGGG
CCAAGGATCGAATGAAGAACGAAAAGTCGCTGACTTTGGACGATATTCCTCGTATTGTCG
CTTCTGAGCAGGCGCGAGACATTCGGCCCAACGCCTTCAAGCACCAGCATCTCGGCGAGA
GCATGAAGCATCTTGTGACCGGTGGAAACGTTTCGTCGTCAGTACAGAGTGCTCTGAGTT
CTACAGAGCCCACATCCTTCTCCTCAGCTCCTTCTGGATCCCAACCCATTCGATACATGT
GTGATTTGGGCTCTGTCGAGATGTTTATTGTGCGGCATGTGGCCGTCATGATGCTTAGGG
ACTTGGTGAAGGAGTGGATGTCGTTCGAAGAACTACTGGAGATGATTGACGTGAAAAAGT
CGTTATCATTCTGGGAAAAGTTTGGGAAAGCATTTGGAGGCAAAACCAACGACGGCGAGT
ACACTGCCTCGTGGGATTTCGACTACCGTGCAGCTGCTGAACGAGGTCTTCCTCCTCGCA
AGGGCTCAAAGGGCGAAAAGAACGACAAGAGCGACAAGGATTCCGTTGTGGTCTTTGGCG
GCAACCTGGACATTCTGACTGAGAAGTTTGGAGTCGAATCACATCTCGGCGTGTCCCCAC
AGCACAAGATGCGCATCCCGCGCTTTGTGGAGGACTGTATTGATGTGATGAAGACTCAGG
ACATGACCATTGAAGGTGTCTTCCGTAAGAACGGTAACATCCGACGGCTCAAGGTTGTGA
CGGAGGAGGTGAATAAGAGCGCCACCAAGACGTCTGATTTCGCCAAGGAGAACTCTGTGC
AGAATGCTGCTTTGTTCAAGAAGTTTCTGCGAGAGATGCCCAATCCTCTCTTTACCTTTA
AGCTGCACAAGCTGTGGATTTCGTCCCAGAAGATCGAGGATGCCACAACTCGAAAGCGAG
TGCTTCATTTGGCTGTATGTCTGCTTCCCAGGTCTCACAGAGACGTGACCGAAGTGCTAC
TCCACTTTCTCAAGTGGGTAGCCTCCTTTTCTCACATTGACGAAGAGAGCGGTAGCAAGA
TGGACGCTCATAACCTCGCCACCGTCATCACTCCGAACATTCTCTATCCCAAGCCCACCG
GAAAAGACCATGGTCCTGGAAGTGCCGGTACTCCTGGCTCTGCTGATTCAGCCGCTGCCG
CTGCTGCCGCCGCCGCTGCTGCTGCTGCTGCTGCTTCTGCTGGAGGTGGAGGTGATGGCT
ACTTTCTGGCCATCGAGGCTATTCATACTCTCATTGAGCACCATGAACTGTTCTCTGAGG
TGCCTGCCGATCTTCTAGAGGTGCTCAAGGAGACCAATCTGCGAGCCGCGACTGCAGACA
TCACTACCAAGGAAATCATGACACGATATGACCAGATGATGGGCGACCCGGCTGCACGCG
CGCGCATTGAGGCCATTCGAAAGCGCCAGAGCTCCGGGTTCCGCACGCCCTCCATGCAGG
TCTCCCACCTCAACAATCTCACTACGCCGGCCATGGCTGGCGAGACCTCCGAGACTAACA
CCGGGGGTCTCCATCCTTCGGACGCAGCCGACTGCTCGGACCGTATGCACTCCATGGTGA
GCACGTCGTCCGTCGGCGAGCAACGCCCTGTGCCTATTAGGATCAACACAGAAATGATCC
AAAAGATGGCGTCACGACAGGAGCGTAACACTGCTATTGTTTAAGCAAGGTGGTCCAAGG
ATGTAACTATTTATGATAATGACTGTATATTAGTAATGAGCTTTTCAATTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13211g_CDS-001

Protein length: 1328 aa.
Product: Conserved hypothetical protein

>YALI0F13211g_CDS-001 MESYRGRVRYPPDEPLHPPALPPSTPPGSGSRSRSGSATGMNFSRPTNKQPPMRRSYHTP
THSRNLSDEHPPGTYYSPLSSPSKDTHDNSSPHMSIRRVTNEPPKPQPTQPITQTHTHTP
SPLPPKINQQLDRHKSMMVMNESTNTDKPPVPQFNFNDKPPSPDLERSSSSAASKSTRKI
CRECNKPISGHFVRALDSVFHVDCFRCADCNSLCSSKFFPVDGNVPSTNGENTPPTSPTT
QVPLCETCYFSRLSLLCFSCGGALRGAYITALGRKYHVEHFSCSKCNSVFGPEDSYYEHQ
GDIFCHYHYSTDFAAKCEGCQTSILKQFVEMYRGGKQQQWHPECYMIFKFWNVRISGVEK
PQVESKDLLSLLETRMEERVLGVWTTLCGYEECTAACISDMLQYSASGKYQLALSATARL
VFKTEQLFVGLDRLLALCGIDELEIHTSKQQGMHPPKLYDDLGKTPKKLCKKIVSFMSMV
SKANEKKLPKMGVTQDLLSLVTTLAHYLKVLIRFGLSTALQHDRKVEFNDASGFSLFLSA
APTREPAVDVLLEGVSNTDPFDQPLMHLGVTALTPDVCVACGKSVEDSCVVLLDVASGSA
SASSNSSQKSHKSKRWHLECFKCSKTGAVLRSGDDIASAAYVDGEVVSEGHYPPSAILPF
AVETRLSQLMFLAKIALARLNILLSRGQPPAGASLEAPRRSSAPDNRGTAGSANSNLNDI
RKLRPDLRGEERRGSADTIGATFSKSSSDLNNDLDGYKMSDSARQSQTSAAERAKDRMKN
EKSLTLDDIPRIVASEQARDIRPNAFKHQHLGESMKHLVTGGNVSSSVQSALSSTEPTSF
SSAPSGSQPIRYMCDLGSVEMFIVRHVAVMMLRDLVKEWMSFEELLEMIDVKKSLSFWEK
FGKAFGGKTNDGEYTASWDFDYRAAAERGLPPRKGSKGEKNDKSDKDSVVVFGGNLDILT
EKFGVESHLGVSPQHKMRIPRFVEDCIDVMKTQDMTIEGVFRKNGNIRRLKVVTEEVNKS
ATKTSDFAKENSVQNAALFKKFLREMPNPLFTFKLHKLWISSQKIEDATTRKRVLHLAVC
LLPRSHRDVTEVLLHFLKWVASFSHIDEESGSKMDAHNLATVITPNILYPKPTGKDHGPG
SAGTPGSADSAAAAAAAAAAAAAAASAGGGGDGYFLAIEAIHTLIEHHELFSEVPADLLE
VLKETNLRAATADITTKEIMTRYDQMMGDPAARARIEAIRKRQSSGFRTPSMQVSHLNNL
TTPAMAGETSETNTGGLHPSDAADCSDRMHSMVSTSSVGEQRPVPIRINTEMIQKMASRQ
ERNTAIV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG