YALI0F12826g

Overview

Description some similarities with uniprot|Q2V6T8 Callinectes sapidus Arthrodial cuticle protein AMP16.5
Locus type CDS
Locus tag YALI0F12826g

Location

Species Yarrowia lipolytica Positions 1721425..1722272
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 848 (nuc.)
Previous locus YALI0F12815g Next locus YALI0F12837g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12826g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12826gYALI0F12826g_mRNA-001YALI0F12826g_CDS-001

Nucleotide sequence

 

>YALI0F12826g
ATGTCCAACTGGTACGAAGAGCCCAAGATTCCCGCCCGAAACTTCAAAATCGGATTCTAC
TCCTTCATTGGTTTCATCGGCAGCATTTACCTCGTGAAGAAGTGAGTATGGACAGGAGAA
ACAGATGCTCAGACAGAATGGTCCCACATGAGAGATGTGAGACGGCAAAGAGGAGCTCAC
AACGGAGGGTGCACAGAAACATTGAGCAAAAAGTTGTTTTATTGTGGGTAATGACGGTCG
ATGGCAATTATGGCGGTATCGCAAACTCATCTATTGCAAACAACACCGACTACCAACTCC
GTGGCGTGGCTCACGCATCCGCTCTCCATCACCTCAGAAACACACGTGCTCACATGTGGT
TGTTTATATTTACGTCCGCGCCAGTTGTGACGTGAATGACGTGTCTCTATGGACCGTTAT
TGCACCATTGAGTACTTTGATGCTTTTGCACCAGCCATTGACCACATACTGTGTGTTCCG
TTGATGCAGCAATTACCCACTCTACCTACTAACATAGATACATCTGGTCCCAAAAAACCG
AGTCCTACGCTCGAAACGTCTTCGAAGTCGAGGACGGCAAGCTGCCTCCCCGAAACCAGG
TCCCCGCAGGCGCTACCGGCGTCGAGCGAGTGTCCTACTACGAGGGCGCTGGTAACGCTT
ACATGGGCAAGAAGATGGGTGACCGGTTCGGTCTGTCTGCCCAGGGTCCCTCCGAATCCC
AGCCCTATCCCAAGCCTGACGACAACAAATAAACGGATCAACCGGTTTCCTTCAAGTTGT
CCTAACCCCACTGACCCATTTGGTCACTTCTGTACATAGCATAACAATAACAATCTGGAA
TACGAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12826g_CDS-001

Protein length: 112 aa.
Product: Conserved hypothetical protein

>YALI0F12826g_CDS-001 MSNWYEEPKIPARNFKIGFYSFIGFIGSIYLVKKYIWSQKTESYARNVFEVEDGKLPPRN
QVPAGATGVERVSYYEGAGNAYMGKKMGDRFGLSAQGPSESQPYPKPDDNK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG