YALI0F12771g

Overview

Description some similarities with uniprot|Q12400 Saccharomyces cerevisiae YOL093W TRM10 tRNA methyltransferase
Locus type CDS
Locus tag YALI0F12771g

Location

Species Yarrowia lipolytica Positions 1710165..1711308
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1144 (nuc.)
Previous locus YALI0F12749g Next locus YALI0F12793g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12771g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12771gYALI0F12771g_mRNA-001YALI0F12771g_CDS-001

Nucleotide sequence

 

>YALI0F12771g
ATGGTAGACGTGACCGAGCCCGTTGCACCCGTCGAGGCAGTGAAGGAGACTGCCGGGGCC
TCTAGCGCCACCCCCGAGGTAGATCGCACGTCCGAACCGCACCCCAAAAACCCCCAGAAC
GTGCCTGCTCCCTACAACACCAAAACTGCCGTGATTCCCGAGGGCATGTCCAAAAACGAG
TGGAAAAAGGCGCAGAAGAAGGCCATATGGGAGAGCAAGAAGGACGAGATTGCCGCCGTC
AAGAAGGAGAAGAAAAAGGCGGCTCGAAAGAGAAAACAGCTCGCCATCAGCCGAGGCGAG
ATCCCCGCCCCCATCCCCCAGGATGAACGACCCCCCCAGACACAACTCCCCATTAGCATT
GTTTTGGACTGCGGATTCGACGAGATGATGACACAGAAGGAAAAGGTGTCGCTCAGTGCC
CAGGTGGGCCGATGTTACAGCGCCAATCGAAAGGCCGATGCCAGGTTCGATCTCACCGTC
AACTCGTTCAACAAGGGACTCAAGGACCGGTTCAACAACGAAATGAACAAGGTGCACGAG
CTGTGGACCAACATCAAGTTTGTGGAGGACGACTACACTGTGCCCGAGGACGAGACCGCA
AAGAGCAAACTGGTCTACCTATCCTCAGACTCGGACAATGTCATCAACGAACTGGAGGAC
GGAAAAACATACATCATTGGCGGCATTGTCGACAAGGGACGGTACAAGAACCTGTGTCAG
GACAAGGCTTCCAAGCAGGGTCTCCAGACCGGTCGTCTGCCCATCGCCGACTTCATCAAG
CTATCGGGACGAAAGGTTTTGACCACCAACCACGTTTTTGAGATTCTGCTCAAGTGGACC
GAGCTCAAGGACTGGAAGGCGGCGTTTGAAGCGGTGCTGCCCATGCGAAAACTTGACCCT
GCCAACTACGGACGAGCCCATCGACGAGCCCGAAAGAAGGCTCGTCTTGCAGAGGGAGCT
GAGGGTAACGACGAAGAGGATGATGAAGATGACGATGACGAGGAGGAGGAGGAGGAGGAG
TCTGTCTCTGCCGAGCCCGAGGTGGTGGAGACAAAGGCTGAGGTCGAGACTGACACTGAG
ACCAAGGCTGAGACTGAGGCCGAAACTAAGGCTTAGGCATGTATTAATACTTTTTTATTC
ACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12771g_CDS-001

Protein length: 372 aa.
Product: Conserved hypothetical protein

>YALI0F12771g_CDS-001 MVDVTEPVAPVEAVKETAGASSATPEVDRTSEPHPKNPQNVPAPYNTKTAVIPEGMSKNE
WKKAQKKAIWESKKDEIAAVKKEKKKAARKRKQLAISRGEIPAPIPQDERPPQTQLPISI
VLDCGFDEMMTQKEKVSLSAQVGRCYSANRKADARFDLTVNSFNKGLKDRFNNEMNKVHE
LWTNIKFVEDDYTVPEDETAKSKLVYLSSDSDNVINELEDGKTYIIGGIVDKGRYKNLCQ
DKASKQGLQTGRLPIADFIKLSGRKVLTTNHVFEILLKWTELKDWKAAFEAVLPMRKLDP
ANYGRAHRRARKKARLAEGAEGNDEEDDEDDDDEEEEEEESVSAEPEVVETKAEVETDTE
TKAETEAETKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG