YALI0F12683g

Overview

Description weakly similar to uniprot|P06787 Saccharomyces cerevisiae YBR109c CMD1 calmodulin
Locus type CDS
Locus tag YALI0F12683g

Location

Species Yarrowia lipolytica Positions 1702400..1702951
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 552 (nuc.)
Previous locus YALI0F12661g Next locus YALI0F12705g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12683g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12683gYALI0F12683g_mRNA-001YALI0F12683g_CDS-001

Nucleotide sequence

 

>YALI0F12683g
ATGGCCAAACCGCGACTTTCATATACAAACGGCGCTCCAAGCAAGGCCAAGCGAACGACT
TCGGGCCAGTTCAACCAGCTGTCACCGTCGCAGATCCAGGAGCTCAAGGAAGCGTTCAAT
CTGCTCGACAAGGATGCTGATGGAATTGTCAATGAAGAAGACCTGGAAGAGATGCTGGTG
TCTCTAGGACGAGATCCAAAGGACGGAGAGGTCCAGGAGATGCTGAATCTGCTGCCCCAG
CCTCTCACATTCGCCTCATTTCTCACAGGCATGTCCAGTCACTTGTGTGACTTGTCTTCC
AAGACAGATCTGCTCACGGCCTTCAGTGCCTTTTCCAATGATGATTCGGGCATGGTGAAC
GTGGAGGATCTGGTGCAGGAGCTCATGAGCGTGGGAATGAGCGAGGAGGAGGCCCGGGAC
TCGCTCGAAGACTTTACGGTCAAGAGTGGCTTCAGCGGGAAGACGGACTTCAACTACAAG
AACTTTGTCAATTTGCTACGAGCCGATTGATGGGATTGTACTAACTATTTAATGGATGCG
GATATGACGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12683g_CDS-001

Protein length: 170 aa.
Product: Conserved hypothetical protein

>YALI0F12683g_CDS-001 MAKPRLSYTNGAPSKAKRTTSGQFNQLSPSQIQELKEAFNLLDKDADGIVNEEDLEEMLV
SLGRDPKDGEVQEMLNLLPQPLTFASFLTGMSSHLCDLSSKTDLLTAFSAFSNDDSGMVN
VEDLVQELMSVGMSEEEARDSLEDFTVKSGFSGKTDFNYKNFVNLLRAD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG