YALI0F12661g

Overview

Description weakly similar to uniprot|P20484 Saccharomyces cerevisiae YKL021C MAK11 Protein involved in an early, nucleolar step of 60S ribosomal subunit biogenesis
Locus type CDS
Locus tag YALI0F12661g

Location

Species Yarrowia lipolytica Positions 1700410..1701861
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1452 (nuc.)
Previous locus YALI0F12639g Next locus YALI0F12683g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12661g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12661gYALI0F12661g_mRNA-001YALI0F12661g_CDS-001

Nucleotide sequence

 

>YALI0F12661g
ATGAGCAAAATCACCAAGCCCAAGAGCGCCCTGAAGGGCTCCAAATCCGACAAGAAGCAG
GTCAAGATGGCCGCGGAGGCCGTGGAGAAAATTGTGGCCGAAAAGCCCGTCGAGGAGACC
CCAGCCGACCTGTCCAAGACGATTGTGAGCACCTCCTCTTCCACGTCGTCAGTTGATCCT
GCTTTTCGAATCGTGACAGGTTCCTACGAACACAATCTCTTTTGTGTTTCTCTCCTGCTG
GGCACCTCGCCTGTTTTTTCGCCCATTTTCCATTTTACTCCTCACATTCAGTCCATCAAG
TGTCTGGCCACCTCTGGACGGTATCTTGTGTCCGGATCGGCTGACGAGAACATTCGAATC
TACGATCTTCAGAAGCGAAAAGAGCTCGGCACACTGACCCATCACTCGGGAACCATCACT
GCTCTCGAGTTCTACAAGAGAAAGTGGCTGTTGACTGCCGGAGAAGACGGAAAGATCTTT
GTGCTGCGAACCAAGGACTGGGAGGTGCTGGCAGAGCTCAAGGGACACGCTCGAGCCGCC
GTGGGCAAGGCCAAGGTCGGTGTTGTCGACATTTCTGTTCACCCCACCGGCCGACTGGCT
CTGTCGGTTGGACAGGACCGAAAGCTGATTCTGTGGAACCTCATGACCGCCAAGAAGGCC
TCTGTCATGGCTTGCTACCCCGACGTGCTCAAGGTGGCGTGGAACCTGGCTGGAGATCGT
TACGCAGTTACCTACACCACGTCCATCTCCTTCTTTTCGCCCGAGACCGGCAAACTCATT
GGAGCCATCAGATCGCCCAAGGATGGTCTGTACCACTCCGAGTACGTGTCCATCGACGGA
AAGGAATATTTTGCCTTCTCCAACTCGCGAGGCGTGATCCGGTTTGTGGACACCAACGAG
TTCGAGGGCAAGACCAACGACACAAAGAACGAGTTCAAGACGGAGGACGAAGACATTGAT
ACCATCTCCTTCAAGGTCCAGCCCCACGCTACCCGAGTCAAGGACTTTTCCTTCCTCATC
CCCGATAATGTTCCCGAGGCCGATCGACACGTCTACATGACCTCGGTTTCCACCGACTCC
AAGCTTGTCATCACCGATATGAACACTCGAGAGACTGTGGGTGCCTACAACACCGGAGAC
CGACTTAACTGTTGTGTCATGGTCCAGGAGGACGTGGAGATGGAGATTAAGAAGGCCTTG
CCCATTCCCGAGAGCGATCACGACATGTCTGCTTCCGAGTCTGAGGTCGAGATGCCCCAG
CCCTCCAAGAAGCAGCAGAAGAAGGCTGCCAAGGCTGCTCGAAAGAACAAAAAGGTGAAG
GTGACTATTGAGAAGGATAACTAGACAATGGCGAGCATGGATGTCAGCGCATTTTCGAGC
GACTCAGCGCTCCTTGTACCTGTATAAACGGAGTACATAAACTAAACTAATAGATCTTGT
ATATCATGGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12661g_CDS-001

Protein length: 448 aa.
Product: Conserved hypothetical protein

>YALI0F12661g_CDS-001 MSKITKPKSALKGSKSDKKQVKMAAEAVEKIVAEKPVEETPADLSKTIVSTSSSTSSVDP
AFRIVTGSYEHNLFCVSLLLGTSPVFSPIFHFTPHIQSIKCLATSGRYLVSGSADENIRI
YDLQKRKELGTLTHHSGTITALEFYKRKWLLTAGEDGKIFVLRTKDWEVLAELKGHARAA
VGKAKVGVVDISVHPTGRLALSVGQDRKLILWNLMTAKKASVMACYPDVLKVAWNLAGDR
YAVTYTTSISFFSPETGKLIGAIRSPKDGLYHSEYVSIDGKEYFAFSNSRGVIRFVDTNE
FEGKTNDTKNEFKTEDEDIDTISFKVQPHATRVKDFSFLIPDNVPEADRHVYMTSVSTDS
KLVITDMNTRETVGAYNTGDRLNCCVMVQEDVEMEIKKALPIPESDHDMSASESEVEMPQ
PSKKQQKKAAKAARKNKKVKVTIEKDN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG