YALI0F12617g

Overview

Description weakly similar to uniprot|F2QP85 Komagataella pastoris Protein phosphatase PTC7 homolog
Locus type CDS
Locus tag YALI0F12617g

Location

Species Yarrowia lipolytica Positions 1691531..1692799
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1269 (nuc.)
Previous locus YALI0F12595g Next locus YALI0F12639g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12617g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12617gYALI0F12617g_mRNA-001YALI0F12617g_CDS-001

Nucleotide sequence

 

>YALI0F12617g
ATGCTACGCTCTTGTACGCGAACCACCGGCTCTACCCTCTCAACCCTGTCCCCCCTCACA
ACCGCCTCCAACGCCAGATTCTTCTCGCTGCTCCTGGACCAGGACAATGTCTCCAAGCTG
CTGCGCTCATTCTGGGGCCAGCCCAAGTCCAAGCCCGTGGCCACGCGAAACCCCATCCGG
CTCTCCGACAAGCTGAAGGAAATGCACTCCCTCAAGTCCATCTCGCCCTCCTACACCTCC
ATGCCCATGTCGTCGCAGATCCCGCACTTCCACCCCACCCCGGCGCCCATCCGCCGAGAC
GCGCTGTTTGTGCAGACCGCCGCCGCTCAGGCCGCCCACTACAGGTACAAAAACGTGCCC
GAAGAGGTCATCCGAGAAGCATGCCCCCGATCGCTGGTGCGAGGGATCGGAGAGACCGAG
TGGATGCCCTCGGTAGAGACAGAGCTGCTAAGAAACGGAGAAGACGTAGCGCTCATCTCC
AAGGACTTCATCGGGCTGGCCGACGGCGTCTCTGGCTGGAACGACAAGGAGGCCGGCCAC
GCAGGCCTATGGGCCCAGCTGATGCTGCTGCGAACATTGTCCATGCTCGAGGTCGAGCTG
CTGCATCCCGAGAACCAGCAAGCCGTGGACCAGACCGAACAGGTCTCCGAGTACCTCATT
TCCGCCCTGGACGATGCCTTTGAATACGCCACCAAGACCATGCATGAGCTCAAGTTCGAG
GGCTCCTCCACCGTTCTCATCTCGTGCCTGGCCGGCAACAACCTCATTGTGGCCAGCATC
GGCGACTCCAAGATGTGGGTCTACCGGGACGGCGAGGCCATCTTCACCAACAAGACCAAT
TCTCGAAAGATGCTGGGCACCCGATCTCCCGGGTTCCCTTCCACCAACCGGGACTTGATT
TCCGTGGTGCCGGTCCAGCCTGGCGACATCATTGTCCAGTGCTCCGACGGTCTTTCCGAC
AACCTGTGGCCCGAGGAGATCCAAAAGACTCTGTACGATGCCATGGCCGAGGGTAAGATG
AACGAGCGGGGTCCTCTGCAGACCGCCGCGGATGCTCTGCTTGCTCGGGCTCTGGACGTG
GCCAACGACAATTTTGCCATCTGTCCCTACATGGAGTCTCAGAAGAACGACTTTGCCATG
GGCGGCAAGAACGACGACACCACCATTTGTGTTTCCCAGGTTCACCAGAACTCATAGAGG
GATTCACCAGCATATACATATTTATTTAGCATTTACATTAATTGAGAATCAGAGGTTGTA
TAATACTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12617g_CDS-001

Protein length: 399 aa.
Product: Conserved hypothetical protein

>YALI0F12617g_CDS-001 MLRSCTRTTGSTLSTLSPLTTASNARFFSLLLDQDNVSKLLRSFWGQPKSKPVATRNPIR
LSDKLKEMHSLKSISPSYTSMPMSSQIPHFHPTPAPIRRDALFVQTAAAQAAHYRYKNVP
EEVIREACPRSLVRGIGETEWMPSVETELLRNGEDVALISKDFIGLADGVSGWNDKEAGH
AGLWAQLMLLRTLSMLEVELLHPENQQAVDQTEQVSEYLISALDDAFEYATKTMHELKFE
GSSTVLISCLAGNNLIVASIGDSKMWVYRDGEAIFTNKTNSRKMLGTRSPGFPSTNRDLI
SVVPVQPGDIIVQCSDGLSDNLWPEEIQKTLYDAMAEGKMNERGPLQTAADALLARALDV
ANDNFAICPYMESQKNDFAMGGKNDDTTICVSQVHQNS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG