YALI0F12595g

Overview

Description similar to uniprot|C5DH17 Lachancea thermotolerans KLTH0E00638p
Locus type CDS
Locus tag YALI0F12595g

Location

Species Yarrowia lipolytica Positions 1685565..1687484
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1920 (nuc.)
Previous locus YALI0F12573g Next locus YALI0F12617g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12595g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12595gYALI0F12595g_mRNA-001YALI0F12595g_CDS-001

Nucleotide sequence

 

>YALI0F12595g
ATGGTCAACCTCCTGGAAGTCTCCACCGGTCTTTTGGCCGCTGCTGGTCTGGTCAAGCGA
GCCGACAACTCCTCGTCCACCTCCCATCACATTGAGGTGCCCAACGTGGGCAACGCGGCG
CTTCTCGAATGGGGCTTCAACGAGGCCCAGAAGATCTTCAACAACTCGCAGGCTTCCAAC
TGCACAAAGTGTCAGGAGGGCATCAATCTTGGCAAGTACATCCACCTGGCCGCCCCCGAT
GTCACCCCCGATCTGCTGGTCAAGCTGTGCTGGCACTACAATTGGCAAGACGATTGCGAC
TCGTGGCAGGGACGAGACATCACTAAGGGAAACAACGGCAAACATATCGCCAACGTCTTC
ACTCTGATGGACGCCTTTGGTCTGGACGGCCAAGCTCTGTGCAATTGGCACGCCACCGAC
ACCTGTGACCCCGTCCAGGTGCCCGAGCCTGATCTCTCGTCCTGGTGGCCCGAAAAGCCC
AAAAACCCCCCCAAGATCGAATCCTCGTACAACGAGACCTTCAACGTGCTGCACATTTCG
GACTTTCATCTGGATCTGCGGTACGAGGAGGGCCTGGAGTCCAATTGCGACGACTACATG
TGCTGCAACTCCGAATCGCACAACAAACGGGCCATTGCCGCCGGCCTCAACCATACCGTC
CAGCCCGCCCAGAAACTGGGATCGTACCATTGCGACGCTCCCGAATCCATGGTCGAAGAC
TCGCTCAAGACCGTGGGGGCCATGGCCGACGCACGTGACTTTGAATTCTCCATTTTCACC
GGAGATATGGTGGCCCACGATCTCCAGGACTGGCTGTCTCTTTCTCACACCTACCAGTCT
GAGGAGGAGGTCTACTATCTCATGAAGAAGTATCTCAAGGACATTCCCGTCTACCCCACT
TTTGGCAACCACGACTCGTATCCCTATGCTCAGCTGGCCCAGAACTCGTCTGGTTTTGCC
GGCGACTTTTCCTGGAACGCCGAGTTGTCTGCCAAAATGTGGAAGGACTTTGGCTGGATC
AACGAGACCACCGAGGCCCAGGCAGAGCACACATACGGTTCGTTTGCCGTCACCACCAAG
CGAGGTCTGCGGGTCATTTCCATCGACTCCAACTTCTGGTACGGCGCCAACTACTACAAC
TTCTGGAACATTTCCGAGCCGGATCTGTCCGGTACCTTCAAGTGGTTGGTGGGCGAGCTG
CTGGAGTGCGAGCGTCAAGGCCAAAAGGCCTGGATTGTGGCCCATGTGCCCTCCCAGGAG
ATGGCGGCGGTGCCCTGGACCACGGAGGTGTTCCGACAGGTGATTCGACGGTTCTCCCCC
CACGTGATTGCCGCCAACTTCTTTGGTCACACCCACGCCGATCAGTTCAACGTCTTCTAC
GAGGAGAACAACAAGTGGACTGAGGAGTCGGCCATTTCGGTGGGCTGGATCATCCAGTCG
GTGACTCCCGTGGACTCCTTCAACCCGGCGTGGAGATATTACGAGGTGGACACCAAGACG
TTCGAGATCATGAACTCCAAGAACTACTACTCGCCTCTGAATCAGACGTACGACTACGAC
ATCAACAAGTCGCACAACGAGACCATTGGCAACTTCTCCTACCCCGTTTTCGAGCCCCAG
ACCCCCAAGCAGTCGCTGGACTGGATCTGGGAGTACTCTGCCCGAGATGCCTACGACCCC
AACAACACATGGCCCGACACTGCTCCTCTGAACGCCACCTTTTGGCACCGAGCCGCCAAA
CTCATTGTGGAGAACCCCTCCTACCGACAGCTCTACTACGACCACTACTACCGAAAGTCT
CCCTACACTCCTCAGGGATGCACCGGCAAGTGTCTTCAGCAGACCTTTTGTTCATTTGTG
GGTGGTTCTCAGGGAGAGCGAACCGAGTGTCTTAAGCTGAAGGAGCTGCCTACTTTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12595g_CDS-001

Protein length: 640 aa.
Product: Conserved hypothetical protein

>YALI0F12595g_CDS-001 MVNLLEVSTGLLAAAGLVKRADNSSSTSHHIEVPNVGNAALLEWGFNEAQKIFNNSQASN
CTKCQEGINLGKYIHLAAPDVTPDLLVKLCWHYNWQDDCDSWQGRDITKGNNGKHIANVF
TLMDAFGLDGQALCNWHATDTCDPVQVPEPDLSSWWPEKPKNPPKIESSYNETFNVLHIS
DFHLDLRYEEGLESNCDDYMCCNSESHNKRAIAAGLNHTVQPAQKLGSYHCDAPESMVED
SLKTVGAMADARDFEFSIFTGDMVAHDLQDWLSLSHTYQSEEEVYYLMKKYLKDIPVYPT
FGNHDSYPYAQLAQNSSGFAGDFSWNAELSAKMWKDFGWINETTEAQAEHTYGSFAVTTK
RGLRVISIDSNFWYGANYYNFWNISEPDLSGTFKWLVGELLECERQGQKAWIVAHVPSQE
MAAVPWTTEVFRQVIRRFSPHVIAANFFGHTHADQFNVFYEENNKWTEESAISVGWIIQS
VTPVDSFNPAWRYYEVDTKTFEIMNSKNYYSPLNQTYDYDINKSHNETIGNFSYPVFEPQ
TPKQSLDWIWEYSARDAYDPNNTWPDTAPLNATFWHRAAKLIVENPSYRQLYYDHYYRKS
PYTPQGCTGKCLQQTFCSFVGGSQGERTECLKLKELPTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG