YALI0F11649g

Overview

Description similar to uniprot|P38211 Saccharomyces cerevisiae YBR004c GPI18 GlycosylPhosphatidylInositol
Locus type CDS
Locus tag YALI0F11649g

Location

Species Yarrowia lipolytica Positions 1538708..1540110
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1403 (nuc.)
Previous locus YALI0F11627g Next locus YALI0F11671g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11649g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11649gYALI0F11649g_mRNA-001YALI0F11649g_CDS-001

Nucleotide sequence

 

>YALI0F11649g
ATGAAACATTTCACAACGCTCATTGTGGTGTTTGTGGCCATCAAGGCATACTTGGTAGCG
CTTGCGCTCGTGGTCCCCCGGCAATATGACACCTCTTCGACCTTGCTGTTCCCCAACAAC
CGTTTTCTGTCGCGTTTGGTCATCTGGGACTCTGTGTTTTTTGTGTCCAGCGCAGAGCGA
TCCCATCTGTACGAACACGAATGGGCCTTCAGCTGGATGTGGTCCCGTGCTCTGGGACTC
GCCGGATCACGTGACGCCATTGCCTACACGGCGATCGCCGTCTCGTCGCTGAGTCATCTT
CTGGCGGCCCTCATGCTCAGAAAACTCACCGAGTCCGTTTTCCACAACAAGCGGTTTGCC
GAAACCACCGCGCTCATGTACATCTTGTCGCCGGCGGGCATTTTTCTGGTGGCGGGATAT
ACCGAGTCGTTGTTTGCGCTTCTGTCGTTCACAGGTTTGTACTTGAGACAGCGGGGCCAG
TACCCGTTGGCAGGAGCAGTTTTGGGAGCGTCCTGCTTACTAAGAGGCAACGGTCTGCTG
TGGGGAATCCCCTTTCTGTTTGATCTGGCCTCTGCCATCAAGCACAACCAGTTCAACAGG
GGAGTTTCTGTTGTTATTGGCGGGTCTCTGGTTGGAGCGGTCTTTCTGTACACCCAGTAC
CTGCCCTGGTCCATCTTCTGTCCCGAGCGCGACGAATGGTGCAACTACTACATTCCTAGC
ATCTACGGCTATGTTCAGCAGCGGTACTGGAACGTTGGTTTCCTGAGATACTGGACGGCC
AACAACATTCCCAACTTTCTGTTTGCCGCCCCAGTGCTCTATCTCATGTACCAGTCCATG
TCGACCAACCCGTCGCTGGTTCCTTTCTACACGGTGCATGCCATCATGGGTTTGGCGTGT
GTCTTCATGTGGCATGTTCAGATCATCACCCGTATCTCCACCTGTCTGCCGACCCTGTAC
TGGTACATGGCCAAGCTGGCTCAGGGGTACAATGGGCACTATGTGGTGCGCTACATTTTC
GTCTGGATCACCTTTCAGGTGGTCATGTGGGGTGCTTATTTGCCGCCTGCGTAGGAACCT
GAGGGTAGGGAAGGAGCGCAAGCGATGTTGCCGTCCCTGATAGCCAGCTGAGCGGCCGTC
GTCATTGGGGAATGTGATTCTCGGCTGTCTACAGCAGCAGCATCATGGTCGGTCTATGCA
TGGATAGATCGACTGAGACATGGAAGGTATGGTTCAATGTCAAGGGTGGGCTTGGGACAG
AAGCAGTGACAGATGGAAGTTACTGAGTCTGAGTCTGCGACGGAGGGGGGTGGTGAAGTC
CGAGTCTGAGACGGTGGAGCCTTATCTTTGAGATTAGAAGGATGGACTAGAATAAAATAA
GCAATCGACACTAGAGCATGACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11649g_CDS-001

Protein length: 358 aa.
Product: Functional ortholog of human PIG-V, putative

>YALI0F11649g_CDS-001 MKHFTTLIVVFVAIKAYLVALALVVPRQYDTSSTLLFPNNRFLSRLVIWDSVFFVSSAER
SHLYEHEWAFSWMWSRALGLAGSRDAIAYTAIAVSSLSHLLAALMLRKLTESVFHNKRFA
ETTALMYILSPAGIFLVAGYTESLFALLSFTGLYLRQRGQYPLAGAVLGASCLLRGNGLL
WGIPFLFDLASAIKHNQFNRGVSVVIGGSLVGAVFLYTQYLPWSIFCPERDEWCNYYIPS
IYGYVQQRYWNVGFLRYWTANNIPNFLFAAPVLYLMYQSMSTNPSLVPFYTVHAIMGLAC
VFMWHVQIITRISTCLPTLYWYMAKLAQGYNGHYVVRYIFVWITFQVVMWGAYLPPA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG