YALI0F11627g

Overview

Description similar to uniprot|H0ESX2 Glarea lozoyensis putative Cysteine dioxygenase
Locus type CDS
Locus tag YALI0F11627g

Location

Species Yarrowia lipolytica Positions 1536448..1537400
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 953 (nuc.)
Previous locus YALI0F11616r Next locus YALI0F11649g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11627g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11627gYALI0F11627g_mRNA-001YALI0F11627g_CDS-001

Nucleotide sequence

 

>YALI0F11627g
ATGGCTCCTCCCCCCACTCTGTCCATGTCATCCAACAATGTGTTGGACAAAATGTCGCCT
CCTCGACAGCAGCAGTCTCGGCTGGAAAAGGGCCGAAAGCAACTGCCTGCGGGCATTGCG
CTGCCGTGCTCGGAGCAGATTCTCAGAAAGCTTTCTGTGTCGTCCTCCGAAGACGAGCGA
CAGACGGGGTTTGAAATGCTCCAGGAGGGCATCCGAACAATTCTGGGCCCGTCGTCCGGC
ATTGATTCCGATGACGTCAACGTCGAAGACCTCATGGACATCATGACCCGGTACCACTCC
ATCGAGTCCGAGTGGAAGGACTTTGCTCTGGAAGAACCCACTCGAGGATACACCCGAAAC
GGAGTGGACAACATCAACAACAAGGCCAACCTGCTTCTGCTGGTTTGGAACCCCGGAAAG
GGCTCGTGCATCCATGACCACGCCGACGCCCACTGCATCATGAAGATCCTCAAGGGCAAC
CTGGTGGAGACTCTCTACGAGTGGCCCGAGGAAGGTGTCGAGGGCCCCATGAAGGTCATC
AAGGAGTCTGTTCGATCCGAGCAGCAGGTGGCCTACATGTCCGACAAAATCGGCCTGCAT
CGAATCAAAAACCCCAGCGAAACCGAGGTGGCTGTCTCTCTGCATCTTTACACCCCTCCC
TGGGCTGCCGAATACGGCTGTTCCATCTTCGACGAGAACACCAGCAAGAGCTCCAAGGTG
AACATGTCCAACCTGTACTCTTGGAGAGGCGAGCTGCAGGAGAAGGCTGGTGGCGACTCC
TGCTAATTCCGGCGTGCTGAGCTTTCCCGCGCCTGGATCCCGCGCCTGGATCCCCCGACT
GAGAAAAAAGCATGATCTACACAGATGTAGCATGAGCATTCAGCGTATTTATTTAATGGT
CTACTGGTAGGCCTACTAACGGATTTATAGATGAATTGATTCTACTGAAGAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11627g_CDS-001

Protein length: 262 aa.
Product: Cysteine dioxygenase, putative

>YALI0F11627g_CDS-001 MAPPPTLSMSSNNVLDKMSPPRQQQSRLEKGRKQLPAGIALPCSEQILRKLSVSSSEDER
QTGFEMLQEGIRTILGPSSGIDSDDVNVEDLMDIMTRYHSIESEWKDFALEEPTRGYTRN
GVDNINNKANLLLLVWNPGKGSCIHDHADAHCIMKILKGNLVETLYEWPEEGVEGPMKVI
KESVRSEQQVAYMSDKIGLHRIKNPSETEVAVSLHLYTPPWAAEYGCSIFDENTSKSSKV
NMSNLYSWRGELQEKAGGDSC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG