YALI0F11253g

Overview

Description weakly similar to uniprot|P53866 Saccharomyces cerevisiae YNL224c
Locus type CDS
Locus tag YALI0F11253g

Location

Species Yarrowia lipolytica Positions 1489812..1492507
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2696 (nuc.)
Previous locus YALI0F11231g Next locus YALI0F11275g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11253g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11253gYALI0F11253g_mRNA-001YALI0F11253g_CDS-001

Nucleotide sequence

 

>YALI0F11253g
ATGGGAAAACGAGGCGGAAAACGAGGGTCGTCACGCGGACGTGGTGGCTTCAATAACCGC
GGAGGACGGAGCGGAAGAGGCGGCCGGGGAGGCCGGGGAGGCCGAGGAGGTGGACGAGGA
GGAATCACCATGCCCACTGGATACCATAACTTTTGCGACGACGAATTGGACGAGTCCATC
AACTTCAACTACAACCGCAAGCCGTCACAGCCCAAAGATTATGACGATGATTCGAGGACG
TCTGGACGCACCACGCCCAAACGAGCCCGTGGAGGCCGGGGACGTGGATCCGGCGACCGA
GGAGGTCGCGGCGGATCACGTGGACGAGGTGGAAACGGCGGATCGAGTCGAGGAGGTAAA
AAGAATGGCTGGAGAGACGAGAAACCGTCGCTGCTGAGCTCCATTCTAAACTCTCGACAA
CACGCGTCGGAGAACCGAGAACACATGTTCAACAAGTCGCTTCGGGGCGCCGAGTTCATC
ACGTTCATCAAATCTGCCGAGGTCTATGATCCGTCCAAATTGCTCAAGGATGTCGGTGTT
ACAGTCGAGGAGGCCAACGTGGTCAATGAGGTGGAAGATATCCATATTATTGTGCCCGAG
GTGATTCCTGAAGTGCAAGACGTGACCGGTGCAGATGCTCAACTCGAGGATCAAGAATCT
GAAGATGAGGAAGTTGTGACTACCATCACCGAGACTTATGCAGATGATGGAGATAACCAA
GAAGACGACGACGACGAAATGCTTGTTGACGGGAACGGACAGTTGGTTGACGATTACGAC
GATGACGAAGATGACGACGACGAAGACGACGAAATTGACGAGGAGGTTGATGACGATCTG
ATTGCCGACGAAAACGCCGTCGACGTGTCTACCCTGCAGGACGCCATAAACGAGGTTGCC
AACGATACCATCAACGACGATCGGAAGGAAGAAGACCCCAGTGAGGGCTCCGAGGCTGAC
GACGAAGAAGATGAAGCAGCTGAGTTTGTCATGGATACAGAAGGAGACCCCGATATGGTG
GACATGGAGTTTATGGAGACGGATTTCGCGTACCTCAACAAGAAGAAGCGGGCCGAAAAG
TCGCGTACTCCCCTGACCAGCTCCACAGCCGTCATAAGTGATCGACCCGTCGCTTCCGTT
TCTGCAGACACAACTCTTGTGGGGTCTGTCGCCTCCAAGAAACGACACAATGCCGATCCT
CGAGCAGTGGATATTCCCGAGTACAACTCCGACATTGATCCGGAGGTGCTCAAGGACTAC
ATCGAGAGTATCAAGAACGAAGATGAGGGCTCCGATGCTGAGAACATTGATTGGATCCGA
TCTGCTCTGGGCACTCAGCTTGGAGGAACTGAGCAATATTATGTTGACAGCGACGACTCT
GAAAATGACGACTTTGACGATGATGACGAGGATGACGAGGAGGAGTACGAGTGGCCCGAA
AATGGTACAGTCGGGTGCATCAGAAACATTGTTGCTACTCGAGCAGCCTCGCAGGGCTAC
CAGTTTATGGTTGAACACACTCTGGACGCTGATATGGAGGAGTGGTGGAACGAGGATCTC
ATTCGAGACTCGGTGGCAGAGCATCTTGGTGTTTCTGTCTCTGAGCTCCCCGATGAGGCG
TACAGATGGTATGTGACTCGTCTTGGAGGCGATATCGAGGATCCTGATCTGTCTGAGGAA
GGAATCAATTACAGCGACTACTATGACGATTCCGACGAAGATGAAAAGGCACGAGAAGCG
TCTGAAATGGACTCGCTCATCCAGAGTTTGATTGACGACGAGGTGGACGACCGAAAGGCG
CTCATGGACCACGGATACACTCCCCCCATGACCAAGTCTCGTGGCAAGAACCAGGTGCCA
AACTTTGGCGTCAACGATCCCGAGCTGCAGGCTCAGCTGGAAAAGCACTGGGTCAATTCC
CGAGCTGCCAAACGAGCCAAGCGAGAACAGCGACAGGCTATGCGAAAGCAGGGTATGTTC
ACCAAGGAATTCAAGCAGGGAGGTATCATCCCCTTGCATGCCAAGTACCCTATTTTGATG
ACTGTTGAGGAGGCCCGCAAGGAAATTGAGATATTCATCAACGCTCCTAACAAGCCCATG
GTTCTGGATTTCCCGCCCATGGGAGCCGAGTTCCGAAGCGTGCTTAAAAAGCTGTCTGCA
TGCTACCACTTGAAGCCTGATATTCACGGCGTTCAGAAGAGCAAGCATGTCAGCATGCTG
AGAACCTCCCGAACGTCGTGCCACAACAACAATTACATCCAAAAGTTTCACGATAAGTTC
CCCAAGAAGTTCAAGCTGGTGATCCGAAACGCAAAGTACTCAACCGAGCAGTACCTGTAT
GAGACCAAGCACCAGAAGGGCTCCAAGCGGTCAGCTGTCCGTGTTCATAACCGAGAAGGT
GAGATTGTGGGTCATGAGGCTCCTGCCATTGACGATTCCAACATTGGACGTCTGCTTCTT
CAGAAGATGGGCTGGACCACGGGCGAGGGTCTCGGTGCTCAGAGCAGAGGTATTTCTGAG
CCCATCATTGCCAAGGTCAAGATCAGCAAGCGGGGTATTGGAGCTTAGATGGGGAGGATA
GAGGTACATCAATTGCATAATAGATGATGATATGGTAGATGAGGTGTAGTCACATTTTGC
AAGCACGAAGTATGTGGCGTACATATATACATGCAAATACATGCATATATCAAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11253g_CDS-001

Protein length: 856 aa.
Product: Conserved hypothetical protein

>YALI0F11253g_CDS-001 MGKRGGKRGSSRGRGGFNNRGGRSGRGGRGGRGGRGGGRGGITMPTGYHNFCDDELDESI
NFNYNRKPSQPKDYDDDSRTSGRTTPKRARGGRGRGSGDRGGRGGSRGRGGNGGSSRGGK
KNGWRDEKPSLLSSILNSRQHASENREHMFNKSLRGAEFITFIKSAEVYDPSKLLKDVGV
TVEEANVVNEVEDIHIIVPEVIPEVQDVTGADAQLEDQESEDEEVVTTITETYADDGDNQ
EDDDDEMLVDGNGQLVDDYDDDEDDDDEDDEIDEEVDDDLIADENAVDVSTLQDAINEVA
NDTINDDRKEEDPSEGSEADDEEDEAAEFVMDTEGDPDMVDMEFMETDFAYLNKKKRAEK
SRTPLTSSTAVISDRPVASVSADTTLVGSVASKKRHNADPRAVDIPEYNSDIDPEVLKDY
IESIKNEDEGSDAENIDWIRSALGTQLGGTEQYYVDSDDSENDDFDDDDEDDEEEYEWPE
NGTVGCIRNIVATRAASQGYQFMVEHTLDADMEEWWNEDLIRDSVAEHLGVSVSELPDEA
YRWYVTRLGGDIEDPDLSEEGINYSDYYDDSDEDEKAREASEMDSLIQSLIDDEVDDRKA
LMDHGYTPPMTKSRGKNQVPNFGVNDPELQAQLEKHWVNSRAAKRAKREQRQAMRKQGMF
TKEFKQGGIIPLHAKYPILMTVEEARKEIEIFINAPNKPMVLDFPPMGAEFRSVLKKLSA
CYHLKPDIHGVQKSKHVSMLRTSRTSCHNNNYIQKFHDKFPKKFKLVIRNAKYSTEQYLY
ETKHQKGSKRSAVRVHNREGEIVGHEAPAIDDSNIGRLLLQKMGWTTGEGLGAQSRGISE
PIIAKVKISKRGIGA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG