YALI0F11231g

Overview

Description similar to uniprot|P04801 Saccharomyces cerevisiae YIL078w THS1 threonyl tRNA synthetase
Locus type CDS
Locus tag YALI0F11231g

Location

Species Yarrowia lipolytica Positions 1485582..1487949
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2368 (nuc.)
Previous locus YALI0F11209g Next locus YALI0F11253g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11231g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11231gYALI0F11231g_mRNA-001YALI0F11231g_CDS-001

Nucleotide sequence

 

>YALI0F11231g
ATGGCTGAACTCGTTGATAAGATGAAGGAGGTGGTTTTGGGCGACAAGCCCGCTGCCGAG
GCTCCTAAGGAGACCAAGGAGGCCAAGCCCGCCAAGGAAAAGAAGGCCGCCGACCCCAGC
AAGTTTGGACAGGCCAAGCAGAAGAAGGTCAAGGCCCCCAAGGAGGGAGAGTCTGCCTCG
TCTCGAGCTCTGGAGCTGGATCCCAAGCCCGAGTTCCTCGATTCGCGAATCAAGATGTTT
GACGAGCTCAAGGTGGAGTATGACGCGTTTGTGGCTGCTCAGGAGCGAAAGCCCATTGTC
GTGACTCTCAAGGACGGCACCCCCAAGGAGGCCACTGCCTGGGAGACCTCGCCCATGGAC
ATTTGCAAGACCATTTCCAAGTCGCTGCCCGATCAGACCGTGATTGCCAAGGTCAATGGC
GAGCTGTGGGACATGGAGCGACCTCTGGAGGGCGACGCCAAGCTGGAGTTTTTGGACTTC
AACTCCGACGAGGGAAAGCGGGTCTTCTGGCACTCGTCTGCCCACGTGCTGGGAGAGGCC
ACCGAGCGACACTACGGTGCCCACCTCTGCATCGGACCCCCCACCGAGGACGGTTTTTTC
TACGAAATGTCAATTGACAACGGCGACACCCACGTCCAGGCCTGTGACTACGATCCTCTG
GAGACCGTGGCCAAGTCCGCCATCAAGGACAAGCAGAAGTTTGAGCGTCTGGTGCTCTCC
AAGGAAAACCTCCTCAAGATGTTTGCTTACAACAAGTACAAGGTTGAGCTAATCCAGAAG
AAGATCCCCGACGGAACCTCCACCACCGTCTACCGATGCGGTCCTCTGATTGATTTGTGT
GTTGGCCCCCATATTCCCCACACCGGCAAGATCAAGGCCTTCAAGCTGCTCAAGAACTCG
TCGTCCTACTTCCTCGGAGACAAGGACAACGACTCCCTGCAGCGAATCTTTGGTATCTCG
TTCCCCGACAAGAAGCTCATGACCGAGCACCTCAAGTTCCTGGAGGAAGCTGCCAAGCGA
GACCACCGAAAGATTGGCCGAGAGCAGGAGCTGTTCCTGTTCAACGACATGTCTCCCGGC
TCGTGTTTCTGGCTCCCTCACGGCGCTCGAATCTACTCTGCTCTCACCGACCTGCTGCGA
AAGGAGTACCGAAAGCGAGGCTACGAGGAGGTCATCACCCCCAACATGTACAACTCCAAG
CTGTGGGAGACCTCTGGCCACTGGCAAAACTACAAGGACGATATGTTCACATTTGAGATT
GAGAAGGAAAAGTTTGGTCTGAAGCCCATGAACTGTCCCGGCCACTGTCTCATGTTCAAG
GCCCGAGACCGATCCTACAAGGAGCTGCCATGGAGGGTTGCCGACTTTGGTGTCATCCAC
CGAAACGAGGCCTCCGGTGCCCTCACCGGTCTCACCCGAGTCCGACGGTTCCAGCAGGAC
GATGCCCACATCTTCTGCATGCCCTCGCAGATCCAGTCCGAGATCACCGGTATCTTCGAC
TTCCTCAAGAAGATTTACACCATCTTTGGCTTTGAGTTCAAGATGAAGCTGTCCACTCGA
CCCGACAAGTACGTTGGTGAGATCGAGACCTGGAACGACGCCGAAAAGCAGCTCGAGGAG
GCCCTCAACAAGTGGGGCGCCAACTGGGAGCTCAACCCCGGAGACGGTGCCTTCTACGGC
CCCAAGATTGACATTGTCATCTCCGATGCCCTCCACCGATGGCACCAGTGCGCCACCATC
CAGCTCGACTTCCAGCTGCCCAACCGGTTCGACCTCAACTTCAAGAACTCGGCTGCCATG
GGCGAGGGAGAGGCCGACTCCGCTGCTTTGTACACCCGACCTGTCATGATCCACCGAGCC
ATCTACGGCTCGTTTGAGCGAATGACCGCCATTCTGTGTGAGCATTTTGCCGGCAAGTGG
CCCTTCTGGCTGTCGCCCCGACAGGTGCTTGTCATCCCTGTTGGCCCCAAGTACAACGAC
TACGCCCAGGAGGTGCGTGACGAGCTCGTTGATGCCGGTTTCTTTGCCGACGTCGACAAC
GGCCCCAACACCCTGCAGAAGAAGGTCCGAGAGGCCCAGCTCAAGCAGTACAACTTCACC
TTCATTGTCGGAGAGGAGGAGAAGACCGCCAAGTCGGTCAACATCCGAGACCGAGACGAC
CAGAGCAAGCAGGCCAAGGCCGCTTCCATTCCTCTGGACGAGGTCATTTCGCGACTCCAC
AAGCTCAAGGACTCTAAGGCTCTCGCCCAGGCTGGCGTTCTTGTCTAATCAATAGATAGG
TAATCACGTATGTATTTGCTACGAGTACAAGCACTTGTACTGCTCCAAGTAGTAGAACCG
ATAGTTTCAGTCAATTTCTCAAATCAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11231g_CDS-001

Protein length: 756 aa.
Product: Threonyl-tRNA synthetase, putative

>YALI0F11231g_CDS-001 MAELVDKMKEVVLGDKPAAEAPKETKEAKPAKEKKAADPSKFGQAKQKKVKAPKEGESAS
SRALELDPKPEFLDSRIKMFDELKVEYDAFVAAQERKPIVVTLKDGTPKEATAWETSPMD
ICKTISKSLPDQTVIAKVNGELWDMERPLEGDAKLEFLDFNSDEGKRVFWHSSAHVLGEA
TERHYGAHLCIGPPTEDGFFYEMSIDNGDTHVQACDYDPLETVAKSAIKDKQKFERLVLS
KENLLKMFAYNKYKVELIQKKIPDGTSTTVYRCGPLIDLCVGPHIPHTGKIKAFKLLKNS
SSYFLGDKDNDSLQRIFGISFPDKKLMTEHLKFLEEAAKRDHRKIGREQELFLFNDMSPG
SCFWLPHGARIYSALTDLLRKEYRKRGYEEVITPNMYNSKLWETSGHWQNYKDDMFTFEI
EKEKFGLKPMNCPGHCLMFKARDRSYKELPWRVADFGVIHRNEASGALTGLTRVRRFQQD
DAHIFCMPSQIQSEITGIFDFLKKIYTIFGFEFKMKLSTRPDKYVGEIETWNDAEKQLEE
ALNKWGANWELNPGDGAFYGPKIDIVISDALHRWHQCATIQLDFQLPNRFDLNFKNSAAM
GEGEADSAALYTRPVMIHRAIYGSFERMTAILCEHFAGKWPFWLSPRQVLVIPVGPKYND
YAQEVRDELVDAGFFADVDNGPNTLQKKVREAQLKQYNFTFIVGEEEKTAKSVNIRDRDD
QSKQAKAASIPLDEVISRLHKLKDSKALAQAGVLV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG