YALI0F11055g

Overview

Description highly similar to uniprot|P05756 Saccharomyces cerevisiae YDR064w YS15 ribosomal protein
Locus type CDS
Locus tag YALI0F11055g

Location

Species Yarrowia lipolytica Positions 1470708..1471596
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 889 (nuc.)
Previous locus YALI0F11033g Next locus YALI0F11077g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11055g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11055gYALI0F11055g_mRNA-001YALI0F11055g_CDS-001

Nucleotide sequence

 

>YALI0F11055g
ATGGGTCGAATGCACAGCAAAGGAAAGGGAATGAGCGCCTCCGCCATCCCCTACTCTCGA
AACGCTCCTTCTTGGTTCAAGCTCACCCCCGACGCTGTCGTTGAGCAGATCATCAAGTAC
GCTCGAAAGGGTCTTACCCCCTCTCAGATTGGTGTCCTCCTGCGAGACTCCCACGGTGTC
TCCCAGGTCAAGGTTGCCACTGGTAACAAGATTCTGCGAATCCTGAAGTCCAACGGTGAG
TATTAATGGTTATTGGTATTAACACAGAGGTTGTGGTCCTGTTGGAAATGGAACAAAACG
GGTTGAATGGTTTTTGCCGAGCTCAAATGGATATGACCATCCGCTACTGCTCGTCAAAGA
CCTTCTTCAAGTTAACTCCGTTTAACGAAAGTGCAAGTTTTGATGTGTTGTACGTCTCTT
TCGTGCAACTCATACTACTCACTTTAGTCAACGCTACAACATGTAGAATCGTGGAAGAAC
ATAGTACTCGTCAAACAGTGTGATTACTGCAGACGACACCATTTGTCTCCACACAGGTAA
CCAGAACCTCTGATTGGTTGTTTGAGAAATTACACATTTTGAACACTGCTGACAGAGAGG
CCTTGCCCCCGAGATTCCCGAGGATCTCTACCACCTTATCAAGAAGGCTGTGTCTGTGCG
AAAGCACCTCGACAAGAACCGAAAGGACGCCGACTCCAAGTTCCGACTCATTCTCATCGA
GTCTCGAATCCACCGACTTGCCCGATACTACAAGTCTGTTGGTGTTCTGCCCCCCACCTG
GAAGTACGAGTCCGCCACTGCTTCCGCTCTTGTCAACTAGAGTGTTTAGTGGTTGTACTT
TACATAAAAATGAAAATGCATTAGCGCCTATTTATCATCAGGACGAAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11055g_CDS-001

Protein length: 152 aa.
Product: Ribosomal 40S subunit protein S13, putative

>YALI0F11055g_CDS-001 MGRMHSKGKGMSASAIPYSRNAPSWFKLTPDAVVEQIIKYARKGLTPSQIGVLLRDSHGV
SQVKVATGNKILRILKSNGLAPEIPEDLYHLIKKAVSVRKHLDKNRKDADSKFRLILIES
RIHRLARYYKSVGVLPPTWKYESATASALVN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG