YALI0F11033g

Overview

Description similar to uniprot|P47154 Saccharomyces cerevisiae YJR117w STE24 zinc metallo-protease
Locus type CDS
Locus tag YALI0F11033g

Location

Species Yarrowia lipolytica Positions 1468645..1470555
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1911 (nuc.)
Previous locus YALI0F11011g Next locus YALI0F11055g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11033g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11033gYALI0F11033g_mRNA-001YALI0F11033g_CDS-001

Nucleotide sequence

 

>YALI0F11033g
ATGGAAGTGAGTATTTGCGCCAGACGGGCGTTTGCACCGACTACAAACACGACACACACA
CGTTGACGCGCCCCAACAGGCCCCAGGCGCGTTTCTACCGCCAAATTGACACTCTCCGCG
ATGGACTGCATGATGCCGGCGGCGTGGCGAACCTCACGACACAATGTGAGCCAAATCGAG
CCAGTCGTCAAGATCAGTTGCCAGTGCCAGACCTGAATGCTGCAAAGATTTCGGTTGTGT
GAGATACAGTTGAGCCAGCGTTTCTGATGGGATTGTGTCGCTAGTTGAAGTGGTGTTGTC
AGTTGGTGGAGTATGATGCGGTCGGATACTAATTGTTATTGGTGGTCGTGTCGCTGGAAG
CTGGCTCTATACGACCTGCTATATGATGCCACCTGTGCGACTGGCTGGCTCTATACCCTC
ATCTGAATTACTCAGTTGTCACTCTGACCATTCTCCTCCGTTCCGTACTAATCCAGCACC
TTCGAAAACTCGACAGCCCCAACGTCCCATGGAGACAGATCATTGTGGGCACCGCCATTG
GCGACTACCTGCTTGAGTCTTACCTTAACTACAGACAGTACCAGGTCTACAAGCGAACCG
AGGTGCCTGCCAGCCTGCAGGGTATTGTCTCCCAGGAGAAGCTGACTGAATCCAACGACT
ACTCCATGGCCAAGATGCGGTTCTCCTTCGTCCACTCCACCTACTCCCTTGTCAATTTCC
TTGCCACCATCCATTTCAACGTCATCCCCAAAATCTTCCATGTCACCAAGATGGGCTTCA
CAAAGAGAATCGCCCCCAAGCTTGCCGGTGCCACCTTCTTTGGTGCCAAGACCCTCCACA
AGCTCGCCCTGTCAACCCCCGTTCACACCGCCTTTGCTTTCAACGTCTTTGGCCTCGTTA
GCTCCCTGCTGGAGCTGCCTTTCTCTTACTACAAGAATTTTGTGCTGGAGAAGAAGTACG
GCTTCAACAAGATGACCCCCAAGACCTTTGTTCTCGACTTCTTCAAGGAGCAGGCCCTCT
CTTTTACCATCCAGGGTCTGTACATTGGCATCTTTGAGAAGATTCTGATCAAGTTTGGTC
TGTCTTTCGTCCCCTACTTTACTGGCTTTGTTGTGGTTCTCCAGATTGTGCTTATGTACG
CCGTTCCTACTCTGATCATGCCCATGTTCAACAAGTTTGAAAAGCTTGAGGACGGCGAGC
TCAAGGACCGATCCGAGGCTCTTGCCAAGAAGCTGGACTTCCCTCTTTCCGACCTTTATG
TCATTGACGGCTCTACCCGATCCGCTCACTCCAATGCCTTCTTCACCGGTTTGCCTTGGA
AGAAGCAGATTGTCCTGTACGACACTCTGATCGAGCAATGCTCCACCGACGAGATTGAGG
CCATTCTTGGCCACGAGCTCGGTCACTGGAAGATGAACCATATCCTGCAGACGCTGCTTG
CCGGCAACGCAAACATTCTGACTCTGACTCTTGGATTCCTGGCGTTTGCTCACAACGACT
CTTTTTACACCTCTCTCGGCTTCTTCAGCAACGACCGACCCGCCGCCTACCTGTTCAACA
CCCTTTATCTGCAGGTCATCAGCCCCATCCAGTACGGTGTCACCTTCCTGATGAACGGCA
TGTCTCGAAAGAACGAGTTTGAGGCCGACCAGTTCTCCAAGGACCTTGGCTATGGCGATG
CTCTGGCCAAGAGTCTGATCACCATCCACCAGGAGAACCTCAGCAACTACGACGGCGATT
GGCTGTACAACTCGTACCACCGATCCCATCCTCTGCTGCTGGAGCGACTTGAGGCGATTG
GCTACAAGCCCAAGGCTCAATAAGTGCGCACTGTCGCACGGACTGAAGGAGATGTATAGT
ATGTAGTATAGTATAGTAAATAGTGATTCAACCGAATTATTGAAGAATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11033g_CDS-001

Protein length: 451 aa.
Product: Zinc metalloprotease, putative

>YALI0F11033g_CDS-001 MEHLRKLDSPNVPWRQIIVGTAIGDYLLESYLNYRQYQVYKRTEVPASLQGIVSQEKLTE
SNDYSMAKMRFSFVHSTYSLVNFLATIHFNVIPKIFHVTKMGFTKRIAPKLAGATFFGAK
TLHKLALSTPVHTAFAFNVFGLVSSLLELPFSYYKNFVLEKKYGFNKMTPKTFVLDFFKE
QALSFTIQGLYIGIFEKILIKFGLSFVPYFTGFVVVLQIVLMYAVPTLIMPMFNKFEKLE
DGELKDRSEALAKKLDFPLSDLYVIDGSTRSAHSNAFFTGLPWKKQIVLYDTLIEQCSTD
EIEAILGHELGHWKMNHILQTLLAGNANILTLTLGFLAFAHNDSFYTSLGFFSNDRPAAY
LFNTLYLQVISPIQYGVTFLMNGMSRKNEFEADQFSKDLGYGDALAKSLITIHQENLSNY
DGDWLYNSYHRSHPLLLERLEAIGYKPKAQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG