YALI0F10307g

Overview

Description weakly similar to uniprot|P25301 Saccharomyces cerevisiae YDR004w RAD57 DNA repair protein
Locus type CDS
Locus tag YALI0F10307g

Location

Species Yarrowia lipolytica Positions 1402178..1403730
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1553 (nuc.)
Previous locus YALI0F10285g Next locus YALI0F10329r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10307g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10307gYALI0F10307g_mRNA-001YALI0F10307g_CDS-001

Nucleotide sequence

 

>YALI0F10307g
ATGGCAGACCTGTATCGACAGACGACAGATGATATCACGATCGAGTTTGAAGACAAGTAC
GAGGACCAGTTCGAGGCATTTGTCAAGTACCAGGTGTCGACATGCGACTTACTGACGGCA
GATCCAAGACTGGTAGGAGCATGGGGCGAACAAAAGGTGCTCAAGTGCCACCAGCTGGCC
ACCGACCTGGAGAGTCGCCTTTCCGAACACATTAGCATGGAGCGAGTCGACTTTGATGTT
GATTCCGAGCGGGAGCGGCCGCTGGACGCGATTTCGACTGGAGTCCGAAAGATTGACACG
GTCATGAATGGAGGTTTTCCTACTGGCACCCTATGCGAGGTTGCCGGCGAGTCGGCGGCC
GGTAAGTCGCATTTCCTTCTGCAATTGTGCGTCAACGTGCAATTGGCGCGAGGGGAAGGA
GGTCTGGGCAAAAAGGCAGTGTTTATATCGACCGAAAGCGGACTGGAAACTCGCCGACTG
GTGCAAATGATGGACCACGTGATCAAGCTGGGTCACGACAACATCTCGCTTCATCACGTG
TCGTTTATAGCGTGCAAAGACCTCGAACAGCAGGACAGAGTCTTCCAATACAATCTCCCC
AATCTCCTGGAAGACAGCTCGTACGGTCTTGTGGTGATTGACTCGTTGGCTGCTCACTAC
CGATCCGAAGAACTCACGTCCAAGGGCGACTTCTCCTCTCGAGATAAACGTCTCTTGCGC
ACCCTGCACCATCTCAAGGGACTAGCCCGAAAACACAACGTCGCAGTGGTGTTTGCCAAC
CAGATTTCTGCTCTACCAGGGAGAGAACTGACTATTGGAGCTGAGTTTCTCCCTACTCTG
CTGGAGAAACAATTGCCGTATTTCTCGGGCTGGAAAGCGCCCGTTGTCTCGCATACTCAA
GATGGTAGAGAGAAACTTGTGCCGGACGCTACTCCTCAAGATTTCATGCTCTCGTCTTCC
GAGTCAGATAACCACCCCTCGGGCAGTCCCATGCTCTCACAATTGTCCTCTCAACACTCA
CTACCATCTTTTTCTTCGCAGCAACCGCTATTTCCCGTGGGATCCAAAGTTCCTACTCTG
GGCCAAGTTCTAGCCAATTCTGTGGACATCCGAGTGGTTCTCAAACACACGGACTCCCAT
AGAACCTTTGAGGTGGTTTTCTCAAACCCATACAAGTTTGACACCTCCGTAATTCCCTAC
GAAATCACCACAGGTGCTCTTGTGGACAAGGACGACATGGAGCTTGTGGAACATGAGCTC
TTGTAAGGCATGGGGCAGACACTGGTGATCCCTCCATGATGATTTATTCCATTTAATGAT
TGCATGATATTTACTTGCAGGCAAACTCACCAGAACTCGCCATATTACTTCTCAGGCGTG
CCCCATGTATCTATTCTGTAGCCGAGAGTTTTGCAGGCGGTTTTTGGACCCATATGCGAA
CGAGTATTTGGACTCGGATTGGGGCCACACAATTATTTCGATATTTGTGCTCGCCATGCT
CCAGATCATTTTGATTATAAATCGTCAACAGTCAAGTTCTATTGATTTGGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10307g_CDS-001

Protein length: 422 aa.
Product: Conserved hypothetical protein

>YALI0F10307g_CDS-001 MADLYRQTTDDITIEFEDKYEDQFEAFVKYQVSTCDLLTADPRLVGAWGEQKVLKCHQLA
TDLESRLSEHISMERVDFDVDSERERPLDAISTGVRKIDTVMNGGFPTGTLCEVAGESAA
GKSHFLLQLCVNVQLARGEGGLGKKAVFISTESGLETRRLVQMMDHVIKLGHDNISLHHV
SFIACKDLEQQDRVFQYNLPNLLEDSSYGLVVIDSLAAHYRSEELTSKGDFSSRDKRLLR
TLHHLKGLARKHNVAVVFANQISALPGRELTIGAEFLPTLLEKQLPYFSGWKAPVVSHTQ
DGREKLVPDATPQDFMLSSSESDNHPSGSPMLSQLSSQHSLPSFSSQQPLFPVGSKVPTL
GQVLANSVDIRVVLKHTDSHRTFEVVFSNPYKFDTSVIPYEITTGALVDKDDMELVEHEL
L*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG