YALI0F10285g

Overview

Description weakly similar to uniprot|Q871F0 Neurospora crassa B7H23.310
Locus type CDS
Locus tag YALI0F10285g

Location

Species Yarrowia lipolytica Positions 1398991..1400725
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1735 (nuc.)
Previous locus YALI0F10274r Next locus YALI0F10307g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10285g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10285gYALI0F10285g_mRNA-001YALI0F10285g_CDS-001

Nucleotide sequence

 

>YALI0F10285g
ATGTCCGAAGCTAACGATACAGACACGGTGACGGCCGGCGAGTTTCTGGAGCGCCAGGCA
CAGCTGGAAAGGGACGCCAAAGAGGCCATGCCGTACGACCCGTCCGAGTGCACGTTTTAC
ACCCAGCCGGCTCGACAGCTGCTGTTCACGTGTCTGACGTGTTCCAAGAAGAGCGGCGCG
CCGTCAGTTATTTGCTATGGCTGCTCTATCCAATGTCACTCGAGCCACGATCTCGTGGAG
CTCTTCACCAAGCGCAACATGACGTGCGACTGTGGTACCGACCGAATGAAGAGCTTTGGA
GGGTGCAACCTGCGAAAGAACTTTGCCAATCTGGACGAGGCGTGCGACACAAACAAGTAC
AACCACAACTTTGACGGTAGGTTTTGTTTCTGCGACAAGCCCTACAACGAAGAGACAGAC
ATCATGTACCAATGTCTGATGCCGGGCTGCGGCGAGGACTGGTACCATGATGTTTGCATT
GGCGTGCCTTCAAAGAGGACGCATCCCGAGGGAGTCAATGTGTTTGATTCCCTCACCGAG
ATTGAGCACCACGAGGAGGTGTTGCCCGACGACCACGAGTTTGTCTGCTACAAGTGTGTG
GAAGAGGTGCCGAGGTTGAAGGCGATTTGGGATCTTCCCGGGGTGGTGAAGATGCGGTTG
GAGCCCCGGTTGGAGCCAAAGGCGACCTCTGGGGCGAAAGTCAGCGACACTGCTGATTTG
GAGACGAAAAGTTCAGAGACTTGTGTGGTCAAAACCGAGTCTGCATCGACTGCTGTCGCT
GGGTCTGAATCGACTTCTGACGAAACGGATAATGTCAAGAAAGAGAAGCGAAATGCTGAT
GAGGCAAACGCTCTCGCTTCCCACCCCAGCAGTAAAAAACTCTTCTCATCGGACAAACCC
TGCAACATGTTTCTTTCGTCCAACTTTCGCAAAATCGTGTGCGAGTGCAAAGACCCGAAA
ATCTTTGGACTCACGCTCACGTACCCGTTTCTGGCCGAAGAAGAGCAGGTGTACGAACCG
CCTCCAGACGACGATGCGGGGTCGTCGCTGCTGGACGCTGGCACGTCTGCTCTTCACAAT
ATCCCCCGTCAACAAGCCATCGACGGTATGGCTGCCTACAACCAGATCAAGGACAAGTTG
TCGGCGTTTTTCAAGCCGTTTGCCGAAGGAGGCAAGGTGGTCACCGATCGCGACGTGACC
GGGTTCTTTGAGGAGATGAAGAAGAAGTCGTGAGTGTGAGTAGTTGGAGTCGGTCGGCAA
CGACCAAGTAAGTTATTCAAGTGTTGTGTGATAGATAACAATTAGCATGATGTATCGGTA
CTTTTGGTCAGTGTTAAACCAGATCTTCGGATCCCTTCATCAATAACAAGAGAGAAGTGG
TGGTAAAAGAACTGGCTCAACAGAATAACTGTGTTTCGATACCTCGGTTTCACTGTCCAG
ACTCCTCCAACCACAGCACAATGTCTCGGTGACGCCTGGAGTAAGTCTCGGCCAAATATG
ACTTTGAGATAGCAAGACTGTGCCTTGTCTAGTATGGATTGAACATATCCTGGTTTCGAT
CCGGTCCAATCAGATACCATAAGCCATCTCTCGGTGGTAGTTTCCAGTAGTTGCTAGTAG
TAGCTGCTTCGCGTTTGTCGTTCCCTCGCAGAGATGTGACGGTGCAGTGGAGACATTGCG
ACAATGTCACGGTCCGTTTTATATATATACTCTTATTTTATTTTTTTCTGGTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10285g_CDS-001

Protein length: 411 aa.
Product: Conserved hypothetical protein

>YALI0F10285g_CDS-001 MSEANDTDTVTAGEFLERQAQLERDAKEAMPYDPSECTFYTQPARQLLFTCLTCSKKSGA
PSVICYGCSIQCHSSHDLVELFTKRNMTCDCGTDRMKSFGGCNLRKNFANLDEACDTNKY
NHNFDGRFCFCDKPYNEETDIMYQCLMPGCGEDWYHDVCIGVPSKRTHPEGVNVFDSLTE
IEHHEEVLPDDHEFVCYKCVEEVPRLKAIWDLPGVVKMRLEPRLEPKATSGAKVSDTADL
ETKSSETCVVKTESASTAVAGSESTSDETDNVKKEKRNADEANALASHPSSKKLFSSDKP
CNMFLSSNFRKIVCECKDPKIFGLTLTYPFLAEEEQVYEPPPDDDAGSSLLDAGTSALHN
IPRQQAIDGMAAYNQIKDKLSAFFKPFAEGGKVVTDRDVTGFFEEMKKKS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG