YALI0F09163g

Overview

Description weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
Locus type CDS
Locus tag YALI0F09163g

Location

Species Yarrowia lipolytica Positions 1280874..1282113
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1240 (nuc.)
Previous locus YALI0F09141g Next locus YALI0F09185g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09163g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09163gYALI0F09163g_mRNA-001YALI0F09163g_CDS-001

Nucleotide sequence

 

>YALI0F09163g
ATGAAACTACCAACCCTCGCTCTGGCCGCAGCAGCTGTCGCTGCTCCCCTGGTAGCCCCC
GTCGAGCAATTCTCGCTCCCCACACAAAAAGGCAACGGCTACCTGATAGTCAACGTCGAC
CGACTGTCGGTGCGGTTCCCCTACGGCGTGGAATTCTCCATCGGCACCCCGGCCCAGCGG
TTCAAGGGCGTGTTTGACACTGGCAGCGAACGTCTGCAGATGAACGGCGCTTCCGACTCT
CGATGCCAAGCCGATAACGACTACGTGTGCCTGGGCGGCGTCTACAACCCCGCAGACTCC
TCCACTTGGAAGTATGACACCAACGGAACCGGCACCTGGGGCGGACAAGGCGCCGAAGGA
ACAGACACCCTCACCCTGGGCTTCAAAAAGGACGAGTGCGACTTCTTCCAGGGCGGCGAC
ATTGTTTCAATCCCCGGCTACGGAATCTACAACTCCAACGACACGGCAGGCTGGGACTCG
CCCATCTTCGGACTGTCCAAAATCTTGTACCCCGAAGAGGGATACAAGAACCTGCCGTAC
TGGCTCAAGGAACAGGGCATTGCCAAGCGACAGGCCTTCTCCCTCTACTCCGAGGCGCCC
ATCGAGCTGGACTCCGCTGCCACCAAAAACGTGAGAACTCAGTGCATTTTCGGCGGAATC
GATCACTCCAAGTACGAAGGACCTCTCGTCAAGCTGCCCCTGGTGTCTGAGACCCAGTAC
TCTGTGCGAATCAACACCATGACCATCGGTGGAGTGGTCCAGCCGTCGGAAAACGCCCGA
AACCTCACTCTGGACACCGGCGTCAACGACATCCGATTCCTGTCCAACGAAACCTCCGAG
TGGATCTCTCAAAAGTACGGAACCCACACCTACAACGGCACCCAGTGGGACATAGCCTGC
GACGCTGAGTTCGACATCAACTACGAGTTTGAAGGCGGCGTTTCCATCCCCGTCAACTTC
AAGCAGTTTGTCCAACACAACCCCAACGGAGTGTGCAACATTGGAATCGAAATCGGAGAC
AACCAGACCGACACCATTGCTGGCGCCTCATTTATTTCCCGAGCATACGTGGTATACGAC
AACGACTACCCATTCCTTCACCTAGCCAAGCGAAAGTACGGCTACTCCAAGCCCAACATT
GAGGTCATCACCGGAGAGATTAGCTAATCACCACCTCCACCACCCCTGTACACACCATAT
ATTCACGGTTCATTAACCATACATAGAAACGTACTTTTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09163g_CDS-001

Protein length: 389 aa.
Product: Conserved hypothetical protein

>YALI0F09163g_CDS-001 MKLPTLALAAAAVAAPLVAPVEQFSLPTQKGNGYLIVNVDRLSVRFPYGVEFSIGTPAQR
FKGVFDTGSERLQMNGASDSRCQADNDYVCLGGVYNPADSSTWKYDTNGTGTWGGQGAEG
TDTLTLGFKKDECDFFQGGDIVSIPGYGIYNSNDTAGWDSPIFGLSKILYPEEGYKNLPY
WLKEQGIAKRQAFSLYSEAPIELDSAATKNVRTQCIFGGIDHSKYEGPLVKLPLVSETQY
SVRINTMTIGGVVQPSENARNLTLDTGVNDIRFLSNETSEWISQKYGTHTYNGTQWDIAC
DAEFDINYEFEGGVSIPVNFKQFVQHNPNGVCNIGIEIGDNQTDTIAGASFISRAYVVYD
NDYPFLHLAKRKYGYSKPNIEVITGEIS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG